barSeed - Barley Seed Development Database

Probe ABC01606

Source Contig ABC01606

barSeed

Links

Affymetrix Source Sequence (795 bp)

>ABC01606 795
CGCCGCCGCCTCTCCCCCCTGATCCCGCCGCCGCCGCCGCTGCCGCTGCCGCGCTCCCAC
CAGGCACCACCGCAAACATGGCTGCTGTCCTCACCCGCCCGACGCCGGGCACGGTCCAGT
GCTTCGGGCGCAAGAAGACGGCGGTGGCCGTCGCGTACACCAAGCCAGGGCGCGGGCTCA
TCAAGGTGAACGGCGCCCCCATCGAGCTGATCCGCCCGGAGATGCTCCGCCTCAAGGCCT
TCGAGCCCATCATGCTCGCCGGCCGCTCCCGCTTCAAGGACATCGATATGAGGATCCGCG
TCCGCGGCGGCGGGAAGACCTCCCAGATCTACGCCATCCGTCAGGCTGTCGCCAAGGCGC
TCGTCGCCTACTACCAGAAGTATGTCGACGAGGCCGCCAAGAAGGAGGTCAAGGACATCT
TCGCCCGCTACGACCGTACCCTCCTCGTCGCCGATCCCCGTCGCTGCGAGCCCAAGAAGT
TCGGTGGTCGCGGCGCCCGAGCGAGGTTCCAGAAGTCTTACCGTTGATTGGCCTGCAGGA
TCGTCGACTATTGGGTGGTTTTCTCTGATTTACCTCCCCACTTTTAGACTCCGTATGATT
AGTTTCGAACCTTGGCAAGATATTGTGGTATGATGTGATGTGCGATGTTTAAGGCTACTC
GGTAGTTGCTCGATTATGTTTTTTTTTTACTTGTTACCTATGTTGAGGAATTTTGATATG
GTTGCGTGCTTGCACTATATTTTATGCTATGTTTCAGTTTTCACCAAACCCAATCAGAAA
TCTCAAGCTTAGCGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64103.1	1285	0.0	454 - 1216	100	763 / 763	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
AK371280	763	0.0	4 - 759	99	755 / 760	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
AK252264.1	728	0.0	24 - 728	99	703 / 709	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_64774.1	3207	2e-155	2597 - 3047	89	400 / 451	CUST_28986_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_64774.2	936	2e-155	359 - 809	89	400 / 451	None	ABC01601 ABC01603 ABC01606
MLOC_7610.2	2227	5e-151	165 - 616	88	398 / 452	CUST_28988_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_7610.4	707	6e-95	164 - 466	87	265 / 303	None	ABC01601 ABC01603 ABC01606
MLOC_7610.3	660	7e-60	164 - 373	87	182 / 210	None	ABC01601 ABC01603 ABC01606