barSeed - Barley Seed Development Database

Probe ABC01601

Source Contig ABC01601

barSeed

Links

Affymetrix Source Sequence (842 bp)

>ABC01601 842
GGCTATATAAACGATCTCTCGTCGTCTTCGTCGCGTCTCCGCGCGGCCGCCCAAAACCCC
GACCCGCGCCGCCGCGCCGCCGAGCACACAGCAACCAAGCACACCGCCGCGCTCACAGCA
ACCAAGCAGACGGCCGCAACCACCATGGCAGCCGTTCTCACTCGCCCGACGCCTGGCACC
GTCCAGTGCTTCGGCCGGAAGAAGACCGCTGTCGCCGTGGCCTACTGCAAGCCCGGTCGC
GGCCTCATCAAGGTCAACGGCGCGCCCATCGAGCTCATCCGCCCCGAGATGCTCCGCCTC
AAGGCCTTCGAGCCTATCCTGCTCGCCGGGAGGTCGCGCTTCAAGGACATCGACATGCGC
ATCCGCGTCCGCGGCGGCGGGAAGACGAGCCAGATCTACTCCATCCGTCAGGCCATCGCC
AAGTCGCTCGTCGCCTACTACCAGAAGTACGTCGATGAGGCCGCCAAGAAGGAGGTGAAG
GAGATCTTCGGCCGCTACGACCGGACGCTTCTCGTCGCCGACCCCCGCCGCTGCGAGCCC
AAGAAGTTCGGCGGTCGTGGCGCCCGTGCTCGTTTCCAGAAGTCTTACCGTTGATCTACT
GCCAGATCACCTCTTGGGTATGGCGGTGGTGGCGTACTGCCTGTCTACTTATCTATCTAC
CTTTTGCGGCTAGTAGTTTCCCATCTTTTGGTCAATGAAATGGATTGTCAGGTGCCCGTG
CAGTATCATTTTGCTTTATGCCTAGTTAATGGGATTATGTTATGTTTATCTTGTGTTAAT
GATGAGACTGGATGTTTGGATGAAAAAAAAAAAAAAAAATCGTTCAAAAAAAAAAAAAAA
AA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_7610.2	2227	0.0	23 - 825	99	802 / 803	CUST_28988_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_7610.4	707	2e-124	463 - 707	99	245 / 246	None	ABC01601 ABC01603 ABC01606
MLOC_64774.1	3207	0.0	2485 - 3083	91	545 / 600	CUST_28986_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_64774.2	936	0.0	345 - 845	93	466 / 502	None	ABC01601 ABC01603 ABC01606
MLOC_7610.3	660	5e-151	371 - 660	100	290 / 290	None	ABC01601 ABC01603 ABC01606
AK371280	763	1e-152	74 - 525	88	399 / 452	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
AK252264.1	728	1e-152	97 - 548	88	399 / 452	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_7610.1	575	1e-127	37 - 287	99	250 / 251	None	ABC01601 ABC01603
MLOC_64103.1	1285	5e-151	689 - 1140	88	398 / 452	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606