barSeed - Barley Seed Development Database

Probe ABC01603

Source Contig ABC01603

barSeed

Links

Affymetrix Source Sequence (1284 bp)

>ABC01603 1284
CACCCAAAACCCTAGCCCGCGCCACCGCGCTCACCGCAGCCAAGCGCCCGCCGCAGCCAC
CATGGCAGCCGTTCTCACCCGCCCGACGCCGGGCACCGTCCAGTGCTTCGGCCGGAAGAA
GACCGCCGTCGCCGTGGCCTACTGCAAGCCCGGGCGCGGCCTCATCAAGGTCAACGGCGC
GCCGATCGAGCTCATCCGCCCCGAGATGCTCCGCCTCAAGGCCTTCGAGCCGATCCTGCT
CGCCGGCAGGTCCCGCTTCAAGGACATAGACATGAGAATTCGCGTCCGCGGCGGCGGGAA
GACCAGCCAGATCTACTCCATCCGTCAGGCCATCGCTAAGTCCCTCGTCGCCTACTACCA
GAAGTACGTCGACGAGGCCGCCAAGAAGGAGGTGAAGGAGATCTTCGGCCGCTACGACCG
CACGCTCCTCGTCGCCGACCCGCGCCGCTGCGAGCCGAAGAAGTTCGGTGGTCGCGGTGC
CCGCGCGCGTTTCCAGAAGTCCTACCGTTGAGCTCCGGCGAGATCTCTTGTTTGGTATGG
CGGCGGTGGTGTACTACTTGCATGCCTATCTATCTACCTTTTACCGCTAGTAGTTTTCTC
ATATTTTGGACAATGAATTGGATATGATGATATCTAAGCACTTTGGTTGTCTTCAATATC
CAGCCTAGTTGAAGGTTTTCTGTTATGATAATCTGATGTTGCTGATGAAAAAAAAAAAAA
GTGAGTGTTTTGTTTGAGCTTAATAATTTGTTTCCAACTTTTTGAACTTGATACTTAGTT
GAATAGATAGAACAGCTTTATAGAGAGAAACTGTGGTATGATATGCCAAACATGTCTTGT
AGTTGCGTTGCAATTATATTGGAATATTATTTATCAATCATCTTGACATTATTCTTTCAC
GACGGCCAACGTGCTCGAGAGCTCGGCGCCGGTGGTGGACGGTAAGCAGTACTACAGCAT
AACGGTGCTCACCAGGACCGCGGACGGAGACGAGGGAGGGAAGCACCAGCTCATCACCGC
CACCGTCGCCGACGGCAAGCTCTACGTCTGCAAGGCGCAAGCCGGAGACAAGAGGTGGTT
CAAGGGCGCCAAGAAGTTCGTCGAGAACGCCGCAGGATCCTTCAGTGTCGCATAAATATA
CATGACCGATCGGCGAATTTAATGGAATCTCCTCAGGGAAGCACCGTGTAGAGACCGATC
CAGGGCATGCATGTGTGTTTCTTTGATTTGTACATGAGGATGGATGAACTAAGAGGTCGA
TTTCCCTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64774.1	3207	0.0	2219 - 3107	99	889 / 899	CUST_28986_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_64774.2	936	0.0	336 - 869	100	534 / 534	None	ABC01601 ABC01603 ABC01606
MLOC_7610.2	2227	0.0	128 - 726	91	545 / 600	CUST_28988_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_54528.1	1050	1e-178	711 - 1050	100	340 / 340	CUST_37207_PI390587928	ABC01603 ABC01604
AK371280	763	6e-157	74 - 524	89	401 / 451	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
AK252264.1	728	6e-157	97 - 547	89	401 / 451	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_64103.1	1285	3e-155	690 - 1140	89	400 / 451	CUST_29017_PI390587928	ABC01601 ABC01603 ABC01606
MLOC_7610.4	707	4e-143	127 - 466	94	319 / 340	None	ABC01601 ABC01603 ABC01606
MLOC_7610.3	660	6e-102	127 - 374	94	233 / 248	None	ABC01601 ABC01603 ABC01606
MLOC_7610.1	575	1e-53	142 - 287	93	136 / 146	None	ABC01601 ABC01603