barSeed - Barley Seed Development Database

Probe ABC01599

Source Contig ABC01599

barSeed

Links

Affymetrix Source Sequence (1054 bp)

>ABC01599 1054
CCCGGCCCAACTCTGGTGCCAGGGGGGAAACCCTAATCCCCCAGGAGCTATAAGGCGCCG
CCAGCGCCGCATTTTCCAAACCCTTGCGCCACAACCAGACGGAAGGTAAGGGAGGAGGAG
GAGAAGGAGAGCGGCGGCGAAGATGGTGTCGCTGAAGCTGCAGAAGCGCCTGGCCTCGAG
CGTCCTCAAGTGCGGCAAGGGCAAGGTCTGGCTCGACCCCAATGAGGTCAACGAGATCTC
CATGGCCAACTCACGGCAAAACATCCGGAAGCTGGTAAAGGATGGTTTCATCATCAGGAA
GCCTCAGAAGATCCACTCCAGGTCTCGTGCAAGGAGGGCACATGAGGCCAAGCAGAAGGG
CCGTCACTCTGGATATGGTAAGCGTAGGGGTACCAGGGAGGCTAGGCTCCCCACCAAGAT
CCTGTGGATGCGGAGGATGCGTGTGCTGAGGCGTCTTCTGCGCAAGTACCGTGAGGCAAA
GAAGATCGACAAGCACATGTACCATGACATGTACCTGAAGGTCAAGGGTAACATGTTCAA
GAACAAGAGGGTCCTCATGGAGAGTATCCACAAGTCCAAGGCTGAGAAGGCAAGAGAGAA
GACCCTATCTGACCAGTTTGAGGCCAAGCGTGCCAAGAGCAAGGCAAGCAGGGAGAGGAA
GATTGCCAGGAGGGAGGAGAGATTGGCCCAGGGCCCCAGAGATCATGCACCGGCACCAGC
GGCTGCAGCTCCAGCTCCGGCAGCAGCGGCACCAAAGAAGGCCAAGAAGTGAAGGTCTGA
CTTGAAGCTTTAGCTTTCTGGTATCATCAAGGGTTAGCCTAATTTTGGAACATCAGAAGT
TCAGAACTGTTTCCTGTGCAATATCGTGTTTGTGTCAACTTGTCAGATACCTTAAATATC
ATATCGTGTTTGTTCTGCTGGATGTTTCAGAGATGCTTAAGCAGAGTTTGTTAAAACATT
TGGGTTCACGGTATTATATTATGCTTTTGAACCTAAAAAAAAAAAAAAAAAGTGCAAATT
TTCTTGATGTGATGATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK354527	3226	3 - 912	100	910 / 910	CUST_26399_PI390587928	ABC01598 ABC01599 ABC01600 ABC07863 ABC19551 ABC36945
MLOC_39391.1	976	1 - 907	100	907 / 907	CUST_26399_PI390587928	ABC01598 ABC01599 ABC01600 ABC36945
MLOC_67057.1	1086	33 - 727	86	608 / 711	CUST_26401_PI390587928	ABC01598 ABC01599 ABC01600