barSeed - Barley Seed Development Database

Probe ABC01598

Source Contig ABC01598

barSeed

Links

Affymetrix Source Sequence (1086 bp)

>ABC01598 1086
TGCGGCTCCACCGCAGCCACACACCACAGGTAGGGGAGGGAGGAGAGAAGAGGAAGCCGA
GACGCAGCGGCGGAGATGGTTTCCCTGAAGCTGCAGAAGCGGCTCGCCTCGAGCGTGCTT
AAGTGCGGCAAGGGCAAGGTCTGGCTCGACCCCAATGAGGTCAACGAGATCTCCATGGCC
AACTCTCGCCAGAACATTCGAAAGTTGGTGAAGGATGGCTTCATCATCAAGAAGCCCCAA
AAGATCCACTCAAGGTCCCGTGCACGCAGAGCCCACGAGGCAAAACAGAAGGGCCGCCAT
TCTGGATATGGTAAGCGCAGGGGTACAAGGGAGGCTAGGCTTCCCACCAAGATTCTGTGG
ATGAGGAGGATGCGCGTGCTCAGACGCCTGCTCCGCAAGTACCGTGAAGCAAAGAAGATC
GACAAGCACATGTACCATGACATGTACTTGAAGGTCAAGGGTAACATGTTCAAGAACAAG
CGTGTGCTTATGGAAAGCATTCACAAGTCAAAGGCTGAGAAGGCTAGAGAGAAGACGCTC
TCTGACCAGTTTGAGGCTAAGCGTGCCAAGAGCAAGGCAAGCCGTGAAAGAAAGATTGCC
AGGAGGGAGGAGAGGCTTGCTCAGGGCCCAAGGGACCATTCAGCAGCTCCTGCTCAACCT
GCAGCGGCACCAAAGAAGTCAAAGAAGTGAAGATCTGACGTTTAAGCTTTCTGTTTACTC
GGTGAAATCAGTTTGGTCTTATCTAAATTTTCAAGTATGAACTGTTTTGTTCAGTCTGGA
TACCCTGGATACTATGTTTAAGTATCTTTGTTATCCCAGATACCCTGGATACTATGTTTC
ATGCTACTGGATGTAGTATTAGATGCTTATGCAAAGTTCCTTCTGAAATGCTGCTGCTTA
ATGCTGATGTCTCTTTCTGTCCGTTTATATCCAAGTGGTTTTGGTATGTGGTAAAAAAAA
AAAGTTTGGTGTATCTTTTGTCAAAGGCATAATTTTAGCTCACTGTGATGAGCTAAGCGG
ATTTGGATTTGTTTTGTTGCTATCTACCTTACTACGTATATTGCTTGCTAAAAAAAAAAA
AAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_67057.1	1086	18 - 1077	99	1059 / 1070	CUST_26401_PI390587928	ABC01598 ABC01599 ABC01600
AK354527	3226	5 - 708	86	608 / 711	CUST_26399_PI390587928	ABC01598 ABC01599 ABC01600 ABC07863 ABC19551 ABC36945
MLOC_39391.1	976	117 - 820	86	608 / 711	CUST_26399_PI390587928	ABC01598 ABC01599 ABC01600 ABC36945