barSeed - Barley Seed Development Database

Probe ABC01388

Source Contig ABC01388

barSeed

Links

Affymetrix Source Sequence (1082 bp)

>ABC01388 1082
TGTCAAACTGTTGAATGACCTTCTTGTGGAGAAGAACAAGGAAACAGGGTGGAACGTGCC
GATCCATGTCGATGCTGCTAGTGGAGGATTTATCGCTCCGTTTCTTCAGCCCGAGCTTGA
ATGGGACTTCAGGCTGCCATTGGTGAAGAGCATCAACGTTAGTGGGCACAAGTATGGCCT
TGTGTACCCTGGTGTTGGATGGGTCATCTGGCGGAGCAAGGACGATTTGCCCGAAGAACT
CATTTTCCACATAAACTATCTAGGAGCAGATCAGCCCACATTCACACTCAACTTCTCCAA
GGGTGCTAGCCAGATCATTGCGCAATACTATCAGCTGATCCGCCTCGGCTTCGAGGGGTA
CAAGCACATCATGGAGAACTGCAAGCTGAACGCGGCGGTGCTGAAGGAGGGCATCGACGC
GACGGGGCGGTTCGACGTGCTGTCCAAGGCGGACGGCGTGCCGCTGGTGGCCATCCGGCT
CAAGGACAGCACCAACTTCAGCGTGTTCGACATCTCGGAGAACCTGAGGCGGTTCGGCTG
GATCGTGCCGGCGTACACCATGCCCGCGGACGCGGAGCACGTGGCCGTGCTCCGCATAGT
CATCCGGGAGGACTTCAACCGGAGCCTCGCGCAGCGGCTCCTCGCCGACATCAACAAGAT
CATCGGCGAGCTGGACGCGCACGCCGTCCACGCCATCAAGCTCTCCACCGCCGCCGCTGG
TGGGGACGGCGCGAGTAAGAGCGCGGTCGACGCCGCCACCGAGGCCTTCAAGGACCTGGC
GGGGAAGAAGAAGGCCGGAGTATGCTGAAGGCTTGTTTGCTGAGACGCTTGCTCTGTCCT
TCATCACGTATTCACGTCTATGCTGTATCTTGTAGTACCATAATTATTTTGTACGTACGT
ACGCGGATTGCTTGCATTCTCTCTTTCGGCTCTGCTGGGCATGTGGTTATGTATCTGTTT
CTTTTTAATAAAAGGGGTTTGCCCCGGCTCCATTTTTCTCAAAGCAGCGGAGCTCAAAGC
TTTTGGGAGGACACTTGGCTAGGAAATACGCTACTCTGTATAATATTGCGCGACGTAAAG
AA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248209.1	2246	0.0	1245 - 2245	99	998 / 1001	CUST_38253_PI390587928 CUST_38278_PI390587928	ABC01373 ABC01380 ABC01388 ABC01633 ABC01634 ABC01642 ABC17092 ABC29482
MLOC_77915.1	1783	0.0	1 - 1045	98	1031 / 1051	CUST_38278_PI390587928 CUST_38253_PI390587928	ABC01373 ABC01380 ABC01388 ABC17092 ABC29482
AK248225.1	1489	1e-128	929 - 1178	100	250 / 250	CUST_38253_PI390587928 CUST_38278_PI390587928	ABC01373 ABC01380 ABC01388 ABC17092