barSeed - Barley Seed Development Database

Probe ABC00036

Source Contig ABC00036

barSeed

Links

Affymetrix Source Sequence (799 bp)

>ABC00036 799
CGCCCACCCGCCTGTCGTCGCCGTCTCGCTCCTCGCCGCCGTCGCAGCCGCCGCAAAGAT
GCCGTTCAAGAGGTTCGTCGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTA
CGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACCGGGCACTCGTCGACGCTCC
TGATATGATCAGGTGCCAGATGAACTTCAAGCGTCTTTCACTGACCGACATCAAGATTGA
CATCAAGCGTATCCCCAAAAAGGCAACTTTGATCAAGGCCATGGAGGAAGCTGATGTGAA
AACCAAATGGGAGAACAGCTCCTGGGGCAAGAAGCTTATTGTTCAGAAGAGAAGAGCATC
GCTGAATGACTTTGACAGGTTCAAGGTCATGTTGGCTAAGATTAAGAGGGGTGGTGCTAT
CAGGCAAGAGCTTGCCAAGCTCAAGAAGGAGGTTGCTGCTTAGAATACCTTAGTGGATGT
TGCATGTTGAGTTTTTTGTTCCAAGTTGGATCTGCTCTATGTTCCAGTGTTCTTAAAGCC
AGAGTTAGTACAACTGTTTTCAGGAAACTATTTCATATCTTTTCATGGCTGTTATTGAAT
ACCCAAGCTAGTTTGCTACAAAAAAAAAAAAAAATTCATTTGAATGTTGCTTGTTTATCC
ATTTGAAAAAAAAAAAAAAAAACGTTTTTACTTGTGACTGTCATTGTGTTCCAGTGGTTA
TTACCTGTTAGAACTTGGCATGCCCTTTGTCTGTCACTATAGTTGGTTACAATATATAGG
TTTTGTCAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_13138.1	4472	0.0	3904 - 4472	98	567 / 581	CUST_22966_PI390587928 CUST_22967_PI390587928	ABC00036 ABC00166 ABC04409
MLOC_44154.1	730	1e-147	160 - 588	89	382 / 430	None	ABC00036 ABC00166 ABC00748
MLOC_13139.1	3039	3e-53	2403 - 2516	100	114 / 114	CUST_12510_PI390587928 CUST_22967_PI390587928	ABC00036 ABC04409