barSeed - Barley Seed Development Database

Probe ABC04409

Source Contig ABC04409

barSeed

Links

Affymetrix Source Sequence (1190 bp)

>ABC04409 1190
ATTCCGCGGTAGTAAAAAGAGATCAGTGCGGGGTCGTGGCCTCCACTCGGCATCTTCTTC
CTCCCCCACATCGCACTTCCTCCCCTGCTAGATTCCTCCCTCCGCCGACCGGCAGGGCCT
CTCTCCTGCAGTTCCCTCGCCCAAGTTCGCACGAGAGAAGGCCAAAAGCACCGCAGTTTG
CGAGATCGTGGAGCGGTAGGGGGAGATGGCAGAGACGGTATTCAGCCCGTGTTTGGAAGG
GATGAACCATGTCAGGTCGGACAGCGGGGTCATGCTGTCCAAGCCCTTCCTTGATGTCTG
CAAGCAAATCTTACCTGTCTTGGATAAATTTGGTGCTGCTATGGCAATTGTGAAGAGTGA
TATTGGAGGAAATATCACGAGGTTGGAGAACAAGTACTCTTCAGACCCAGCAAAATATGA
GCACTTGTACACCATGGTCCAAGAAGAAGTTGAAAAGAAGACCGCAAAAGGTTCATCAAG
CTGCACCAATGGACTTCTATGGCTCACGAGGGCCATGGACTTCCTTGTTGAACTGTTCCG
TAATCTGCTTGACCATCCAGACTGGACTATGAGTCAAGCATGTACTGATTCATACACAAA
AACTCTGAAGAAATGGCATGGCTGGCTCGCCAGCTCCAGTTTTACGGTTGCTATGAAGCT
TGCTCCTAACAAAGATAAATTTATGGAGGTAATTAGCGGAACGGGTGACATCAAAGCAGA
CATTGAGAAATTCTGCACCACCTTTTATCCCTTTCTCAAGGAGAATCATGACTTCCTGGC
CAGTGTTGGACTCGATGACATGAAGGCTTCTTAATGCAATACACATCGACAATCATCACA
GAATATCAAGTCTTGCTATTTTCTCAAATTTTATTGTGGCCAAGAATACACTGTTTTGCA
TACTGATCTTAAGAAAATTATAGACGAATAATAAGTCTATCAAAACATTTGGGTGTTCAT
GACCCATATTAGCTACTTACATACAGAATGAAATGAATGGATGCATGGGATCAAAATTAA
CTTTTGAAGTCGCTTGGTTGTCACCAAGTCGGTCATTTTACCTGTTGATGTAACTGAGAA
TGCAGAGGATGCAGATATGTGCTGGTCTTGTCGTTCCATTTATAAACTGCTGTAAAAGTG
ATGAGGCAAGATGCAAATTAAGAGTTTGTTATTGATGCAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_13139.1	3039	0.0	1 - 1079	100	1079 / 1079	CUST_22967_PI390587928 CUST_12510_PI390587928	ABC00036 ABC04409
MLOC_13139.2	634	0.0	1 - 594	99	590 / 594	None	ABC04409
MLOC_13138.1	4472	6e-62	3049 - 3181	99	132 / 133	CUST_22967_PI390587928 CUST_22966_PI390587928	ABC00036 ABC00166 ABC04409