- Transcript HORVU6Hr1G000280.24
- Transcript IDHORVU6Hr1G000280.24
- Gene IDHORVU6Hr1G000280
Barley RTD
Exon Structure of HORVU6Hr1G000280.24
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr6H | 1 | 709178 | 709094 | + |
| chr6H | 2 | 709652 | 709277 | + |
| chr6H | 3 | 710469 | 710377 | + |
| chr6H | 4 | 711737 | 710916 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1376 bp)
>HORVU6Hr1G000280.24 1376 150831_barley_pseudomolecules GGTGGATACAATACACAGGCATTTTGCTCTGTCTATGACTCGGTATCTGGTGTTTGGGGA GGTGTTTTCTCGACCGCGATATCAAAGCCTTCATGTGATCGAGAAGCCGGCATACTACTA TGTTACCGACGGGTGTTTTCAGCTCTTACGGATGGAGGGTGGTGGACTTGGCCTTGCTGT TTTGTTGGGCCTGACCATCCAATTGTGGGAGAGGAAATCTAACTGTGATGGCGTCGTCGG GTGGGTGTTGCTGCAGAAAACCATTCCGCTGGAGGGGATGTTTCCAAAAATGGATTCTGT ACGTTTCGTCGGGTATGATGAGGACACAAATGTGATTGTTCTCACTTCAATGACTGGCAA CTTCACACTCCAGCTTGACTCGATGCAGATCAAACATATTGTTAAAAGAAACAACATATG TTACGACCCGTTTTATCCCTACACCAATTTCTATACTACAGCTAGGCAAGGCAACTTGGC GGGAAGGGATGGATCTGGAACTAATTGTGATCGGACCAGATCTGCTAACGTGCTACCTTG GTCGAATAATTTAGGTATTGAGAGTTAAATTCGGGTTGCTGAGACGCAGCCATGGCTAGT TGGCGCAGGGAAGTTCTTCTATTCTGCTGAGATGCAGACATGGCTAGTTGGTGCAGTGAA GTTCTTCTTCTATTTTGTATGGTGTGGTCGACGCTTAAAATGTCCTGCTATGTAGCCTGT TGGATCCTCTACTATGTATGCTGTGGCAGATGCGGTGGTCGATGCTGAGACGTCTCCTCT ATGTTGTAGGGTCGTGGTCCGTGAATTGAATTTATCGGGTTTAATCATCCGAACTCTTAT ATATTTGTGTGCCTAGTGACTTGTCGAGTTGGTTCGGTTAATGCTTTGCTCTGTGATGCG AGGTACTAGCAAGGTGGATGGACAAGAAGCAGTGGGCTCTGGCACTTTACAGAGTTTCTT TGTGAAGTCCCTAACCGCGAGTCTTGCTAGTGATCTAACTGTGATAGTGCTGGTCACATC ACCACTTGCAGCAGAGGCAGACAATGCTTGTATGTGCCCGGTTTTACTGCCCAGTTTAGC TTTAGTAATTTCAAAAGTATCCCCTTCTTGAAGCATATACACTTTCATATTCCGGTGTCT GGATATTTGCTGCTGATAACTTGTCATGTTTATTTTAGCTTCAGTTGGATTTCCGGATTG CAATGCTGGCTCTTTCTTGGAGGAGACAAGTTAAAAAATGTTGTCGGTTTTGGTTTCAAC TTCAAAGAGTGTTGTGACTTGGCTCTTAATCAGAAGAGTTGTGAGATTTTATTTGAACTT TGTTTGACTGGATAGAATTACTGATTTTTCCTTAATTGCTTGTCCTATTCTGGGTC