Transcript Data
Barley RTD
Links



Exon Structure of HORVU5Hr1G081420.3

ChromosomeExonStartStopDirection
chr5H1564070290564069450-


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7None-----
TAIR PP10None-----
BRACH PP3None-----




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (841 bp)

>HORVU5Hr1G081420.3 841 150831_barley_pseudomolecules
GCCTGACTTATAATGAGGTTTAGGGCCAGTTCTTTTAGGGTTTATGGGTGGCTGCCAAAA
TAAGCTGCCACCTATCCAGCTTATTCTTGCAGCCCAACTAAATTTTATTCTAGAAGCCTA
CTACTATGATATTGTATTATGCTAGTGAAATGTACTCTTAGTTTCTTCTTATTAAAAATT
GTTTGTTTGCTCATGGAGGTTGCACATATCTGGACCTCATGCGTTGATCATTTCAAAGGA
AATACAAGGAAGTTAGTATTGGTCTGTGTTTCTGCAGTGCTTTGGGCATTGTGGAGTTAT
AATTCTTGCTTCCAGATCATTAGATTGATGGATCCTTTTTCTACGATTAAGCTAACTGGC
TCTTGGATACATTTTTGGCCTCTCTTGCAGAAAGAGGAGGCAAATGGAAACCTGGTGCAG
TGGGGAACAAAACTGTTTGAGCTGGTGGCTACTGGCTAGTGATGTCTTTGCTTCGTCGCG
AGGATGGAGGCCTACTCACCTTAGGGTAGGTGCTTAGTGTGCTTGGTTACCCAAGATGAT
CAAGTTAGATGGTTCTTTTGGGGCTGCAGGAGTATCTTCTAGTGTCTGTATGACTGTATC
CTACCTTGGAGATGTTGGCTTCATTTGTCTTCCCTAGGTAGCAGCAATGCTTGGTGGTTC
TGCCATCCGATTTCCTTTGAGTTGTCACTAACTGTACTCATCTGCCCTGAACTTTCTTAG
ATTGGTTTGTGCATCTGTTCGCATGTTAACCGTATGTTATCCGCCCGTGTATGTTTTTGA
AGATTTGGCATCCAGTTGCGATGTGTGATGTTGATGGCGCTGAAAGAAAAGGTTAATGGT
G