- Transcript HORVU5Hr1G051890.12
- Transcript IDHORVU5Hr1G051890.12
- Gene IDHORVU5Hr1G051890
Barley RTD
Exon Structure of HORVU5Hr1G051890.12
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr5H | 1 | 405765945 | 405764297 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1649 bp)
>HORVU5Hr1G051890.12 1649 150831_barley_pseudomolecules GATATCTTAATGCATGAAAGCCTCTAAAGCTACTTAGAGAAGAACCTCTAGTGTCCCACA TTTGAATGGCTTCATCTAGTGGGTTTTACCCTAATTTAGGGAGTTTCCCACGTTAATATT TGGTGTATATGTGTGTTTATATTGATGTTACATTTTTGTAGAAGAATGTCTAGAAGCACT TAGTACTTGTCCTAGATATGTGTTGGAAGCACTCAGGGAGAAAAGAAAGTACTTCCGCTC GCTGCTTGCATGACCGCACAAGGCAGCTGAGGCAAGAACAGAATTCAGAAAGGTGCGCTC CTGCCCTGCGCACCGCGTCGGCCGTCACTCCGGCGTCGGCGGCCACCAGTCTCGCCGCTC CCCACTCCAGGGACGGCGCCTACCTCCCGCTCCTAGGTGCCATGGCCTCTAGGGTCTTCC TGTCCAGGCCCCTCTCGCTGGAGCCCGACTCCCCCCCGCAGTCTTCGCCAAGATCCCGTT GCATGGTCGCGGCCTCAGCTCAGATCTCTCATCGTGCCGTAGATCCTGGGCACCGCCTTC GGTCCGCTGACCGCTCGTGCAGGGTGGCGGCACGGGGGCCTCTTGCGCCCCCACTCATCC TCCGGCGAATGGTGGGTGGCAGACCAAGATGGGTCGTCGCCCGCGGGCTCCGCCTGTCCG TGCCCCACCTGTGCGACGTCGGCGCCTGGCGGGGCGGCCCCGTGCACTGCCGGCCCCTCG ACCGCCGCCCTCCTCAAGGCCACCCCCGAAGCTTCATGGATGCTGCTACAACTGCAGGAG TGATGGGCATATCTATGTCGACTGCACGAATCCTACGTTCCGTGTCCCGGTGCCGTGGGG CCGGTCACACGTCGCGCGGGTTTACGTGTCCCCGCAGCCCCTCTCCGGTGGAGAAGCCGT CGCGTCCCCCGCCGGCCCTCCGCTCTAAGGTGACCACGTCCCCAAGCCCCGACCACGCAG TCTCCTTCCGATCTGCCACTCCGTCGCCTGGCTCGTTTCGAACATATCTATACTTTTTAA TTGTTCATGCTGATATGTTATTATTGTAAGATACTTTTTGTGCAGTCATATGCCAATTTA TAATATTTTTGAGCACTAGCCTATTGACCCAGTGCCCAGTGCTAGTTCCTATTTTATGCG TGTTTTTTTGCTTTGCAGGTTTACCCTACCAAACGAATTTCAAATGCCACAAAACTTTAA TATGATTTTTTCTGGACTATATGAAGACCTGCAAGCATCAGAAGTGGACGAGAGGCCGAA CGAGGTAGGCACAAGCCAACAGGGCGCGGCCGCGCCCTAATGACTTGTGCCCCCCTAGAT GCCTCCCGCCGTCCCTCTCTGACCTATAAATTCACAAATATTCCGATGCACTCCCGAAAC ACTTTTTCCGCCGCCGCAAGTCTCTGTTCTGACGGAAGGCCATCTAAACCTCCATTCCGG CGATCTGTCGGAGGGGAGATCAGTCACGGAGGGCCTCTACATCAACCTTGTTGCCCTCAC CGTGATGTGTGAGTAGTTTACCACATACCTACGGGTCCGTAGGCAGTACCTAGATGACAA TCTCTCTCTCTTATGATCTTCAATACCATGTTCATCGCATCTTCGCTTTGATCTATCCGA TGTAATCACTATGTATGGTGTGTTTGTTG