- Transcript HORVU5Hr1G051890.11
- Transcript IDHORVU5Hr1G051890.11
- Gene IDHORVU5Hr1G051890
Barley RTD
Exon Structure of HORVU5Hr1G051890.11
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr5H | 1 | 405765225 | 405764077 | + |
| chr5H | 2 | 405765998 | 405765455 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1693 bp)
>HORVU5Hr1G051890.11 1693 150831_barley_pseudomolecules GCCGAATATTCTATGTTAGCCTTCACGGGAGAAAAAAATGAAATTAAAGGGACCAGAGGA AAATTGAAGGAAGAACAACGAAAGGGGTTTGTCCCCAGGGCTGTGAAGTTCAGATCTACC ACCCCATCTCTGTAAAGTTATGGTTCCACCATCTTTGATGAGTTTATTCTAATCCTTACC TTTTGCAACCCTAAATCTTACTGTTGTCATCTAAGACAGTGATATCTTAATGCATGAAAG CCTCTAAAGCTACTTAGAGAAGAACCTCTAGTGTCCCACATTTGAATGGCTTCATCTAGT GGGTTTTACCCTAATTTAGGGAGTTTCCCACGTTAATATTTGGTGTATATGTGTGTTTAT ATTGATGTTACATTTTTGTAGAAGAATGTCTAGAAGCACTTAGTACTTGTCCTAGATATG TGTTGGAAGCACTCAGGGAGAAAAGAAAGTACTTCCGCTCGCTGCTTGCATGACCGCACA AGGCAGCTGAGGCAAGAACAGAATTCAGAAAGGTGCGCTCCTGCCCTGCGCACCGCGTCG GCCGTCACTCCGGCGTCGGCGGCCACCAGTCTCGCCGCTCCCCACTCCAGGGACGGCGCC TACCTCCCGCTCCTAGGTGCCATGGCCTCTAGGGTCTTCCTGTCCAGGCCCCTCTCGCTG GAGCCCGACTCCCCCCCGCAGTCTTCGCCAAGATCCCGTTGCATGGTCGCGGCCTCAGCT CAGATCTCTCATCGTGCCGTAGATCCTGGGCACCGCCTTCGGTCCGCTGACCGCTCGTGC AGGGTGGCGGCACGGGGGCCTCTTGCGCCCCCACTCATCCTCCGGCGAATGGTGGGTGGC AGACCAAGATGGGTCGTCGCCCGCGGGCTCCGCCTGTCCGTGCCCCACCTGTGCGACGTC GGCGCCTGGCGGGGCGGCCCCGTGCACTGCCGGCCCCTCGACCGCCGCCCTCCTCAAGGC CACCCCCGAAGCTTCATGGATGCTGCTACAACTGCAGGAGTGATGGGCATATCTATGTCG ACTGCACGAATCCTACGTTCCGTGTCCCGGTGCCGTGGGGCCGGTCACACGTCGCGCGGG TTTACGTGTCCCCGCAGCCCCTCTCCGGTGGAGAAGCCGTCGCGTCCCCCGCCGGCCCTC CGCTCTAAGGTTTACCCTACCAAACGAATTTCAAATGCCACAAAACTTTAATATGATTTT TTCTGGACTATATGAAGACCTGCAAGCATCAGAAGTGGACGAGAGGCCGAACGAGGTAGG CACAAGCCAACAGGGCGCGGCCGCGCCCTAATGACTTGTGCCCCCCTAGATGCCTCCCGC CGTCCCTCTCTGACCTATAAATTCACAAATATTCCGATGCACTCCCGAAACACTTTTTCC GCCGCCGCAAGTCTCTGTTCTGACGGAAGGCCATCTAAACCTCCATTCCGGCGATCTGTC GGAGGGGAGATCAGTCACGGAGGGCCTCTACATCAACCTTGTTGCCCTCACCGTGATGTG TGAGTAGTTTACCACATACCTACGGGTCCGTAGGCAGTACCTAGATGACAATCTCTCTCT CTTATGATCTTCAATACCATGTTCATCGCATCTTCGCTTTGATCTATCCGATGTAATCAC TATGTATGGTGTGTTTGTTGGGGTCCGATGAATTGTGGGTTTATGTTCAGATTATTCATG AAAAGTATTTGAG