Barley RTD

Transcript HORVU4Hr1G063820.5

Transcript IDHORVU4Hr1G063820.5
Gene IDHORVU4Hr1G063820

Transcript Data

|Exon Structure|
|Homologues|
|Barley GBrowse|
|CDS Sequence|

Barley RTD

Links

Exon Structure of HORVU4Hr1G063820.5

Chromosome	Exon	Start	Stop	Direction
chr4H	1	534645936	534645827	-
chr4H	2	534646135	534646038	-
chr4H	3	534646860	534646729	-

grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons

Homology to Model Species (BLASTX to E-value < 1e-30)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP7	None	-	-	-	-	-
TAIR PP10	None	-	-	-	-	-
BRACH PP3	None	-	-	-	-	-

Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons

CDS Sequence (340 bp)

>HORVU4Hr1G063820.5 340 150831_barley_pseudomolecules
AGGATGATGATGATGCTCAGCTATTACAGCAAGCACTTGCTATGTCAATGGATGAGGGAG
CTTCAGGAGCTGCAGCCGTGGCTGATGCTGCTATGGCAGAAGCTGCTGCAGATGACCAGG
ATTTGGCATTGGCTCTTCAAATGTCTGTTCAGGACGCAGAGGCGTCTGGTCAATCTGATA
TGAGCAAAGTGTTTGAAGACAGATCATTTGTGACATCCATCCTTAATTCGCTTCCTGGTG
TTGACCCCAATGACCCATCTGTGAAAGATCTACTGGCATCTTTGCATGGCCAAGGAGAGG
TAAGAAACCTCTTTCCTATCCTTACAAGTTCCCTTTGCAT