- Transcript HORVU3Hr1G039100.35
- Transcript IDHORVU3Hr1G039100.35
- Gene IDHORVU3Hr1G039100
Exon Structure of HORVU3Hr1G039100.35
Chromosome | Exon | Start | Stop | Direction |
---|---|---|---|---|
chr3H | 1 | 230456500 | 230455988 | + |
chr3H | 2 | 230456754 | 230456614 | + |
chr3H | 3 | 230457777 | 230457660 | + |
chr3H | 4 | 230458200 | 230458030 | + |
chr3H | 5 | 230458853 | 230458788 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP7 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |
BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
Click here to see more tracks within GBrowse -->
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1009 bp)
>HORVU3Hr1G039100.35 1009 150831_barley_pseudomolecules TATATGTTCACATATTGATGAAACTGAAAATGCTTCTGCTATTTCAGGTTCAACTTGATA TTATGCCAGGCGAGAGACACATAGAGTTAGGGAACGGCCGAGCTCGCCTCCGAGGAAGAG AGATGATTGTCGTCCCTTGGTCGAGGATGGAGCTGACACGCTGTGACGCCACAGCTATTG AGGCTATCCGTCAAGTGTGGCCGGATTTGGGCATCTGGTGTTGTCACCTAGGCTGGTGTT TCTCCTCTATGCACGCTTGCTTTATCGTTGCCGGATCAATGCACTCGAGGAGGCGGCAGT GGATCCCTAGGTTTTTCGGTTTTTGAAAGAGAATTTTGTTTTTGCGATTTTCTACATGCG TTCCATCAGCAATTGAGAATCATGTGCAAGCCGTGAGATTTCGGAACCACTAGATTGTGA CAGTGCAGGAAGTAAAATATGCGTCGGAGACGGCTATGAAGGCATCAACATGAACCGGAG GGCCGTGAGGGACATCAAGAATATGATCAGCATGTTCAGATTTTCACATGACTGATGCCC AGAGCTAGCAGGTCTCAGGACTGAGCTCGTGCCCATGCGGCAGAGCAAGGGATACTTATG GAACATATACGTTGTGCCAATGCATCGTTAGGCGAACATCTTTCTATTTTGCAGCAAGTG CAGATGGTTATACGTTTGAAACATCAACTGGCCTGTCAAGAATGTGAGAGGCCCTCGGGA GTGAAAAAACTATCATTTGAGATAGTTGTTGGATTGAACAGCCGGAGCGTGGTGGCAAGG CAGCTAGAGACAAAAAGGGAATTGGTGAAAGAGCAACTCGCACATCTATAGGTCTCTTGG AATCTCACATTTATCAATTTATGGAAAAGGGCATCCATTGGCATTCTAATAATTTTGTTA GAGAACGGCATGGACTGAGGCAGCCGATGTGAACGAACACCGGGTACCCATAAACAAGAG GAAAAAACAACACATGTACAACGACAACAAGGTTAGCTAAGAAAAAATC