- Transcript HORVU3Hr1G037940.7
- Transcript IDHORVU3Hr1G037940.7
- Gene IDHORVU3Hr1G037940
Barley RTD
Exon Structure of HORVU3Hr1G037940.7
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr3H | 1 | 216303945 | 216303561 | + |
| chr3H | 2 | 216306030 | 216304557 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1859 bp)
>HORVU3Hr1G037940.7 1859 150831_barley_pseudomolecules GGAACGTGTTACGTGTTCTCCGGTTCTTCCCCGAGCTAAGCTCGACCTCGCCCTCCCGTC CATTCCTAACACGCACCGGATATCTCCTCCTGCCGAAGCGCATGTACGACGCCGGCAATA CAGCCACCGGCTCCCCTCCCCTTCCCTCTTATCTGCCGCCCGAATATCCGACGGGTGGCA TCCGACGCGATTTTCTTTTGTTGGCTTTTGCCCAAATCTCACCTCGTTCCTGGATCGGGT TTCTGCTTTCTTTCTTGATCAATTGAAATCTGGAATCCGCAGCTCGGGCATTCGGCGGAC AGAGCGTTCCGGAACTGGTGAGGCGAGGCCGCGGATAAGCACCAATTTGGTCGTCGGCGC TTCAGGGGTCTTTACCGATTTATTGAGATGGTTGGAAAAGGAAGCTATGTTCCGCCGCAG TATGTTCCGTTATATGGTGTAGATACTGAGGAGGATAGCGTTCCTGAGGTGGAGGAGAAC ATTGCCACGCGCCAAAGATTAAGCAGGGATCCTACACAATGGTCTTCAGGCATCTGTGCT TGTTTTGATGATCCACAGAGCTGTATGCTACTTTCTGACCCGTGACTCCTTGAATTACAG AAGGAAAGATAAAAGGTGCTATTTGGTTGCATGATAGGATAAAAAGTAAATCTTCAAACG GTACCTAGTAGCCTATTTAATATCTTCGTTTTTCTGTACCTAGTGGTGGTTAGTCTGATG TTCTCTTAGTCTTACTACATAGTGCATAAGGAAGTAGGAGCAAGTGCATAATACAGAGAG AAATTGTTCATAGTTATGACTCATGAGAAAAACTTCTTGCCTTTATTTTTTGAATTTCAG TAGTTGGTGGTGCTCTGAGTTATATGTAGTTCTTGTAGAGACGGGCAGTACCTCTATATT TCTTGGCCGCTGGGGTAACCTGGTCAAATGCTTAGCTACACCTCTAGGTTATAAATAACC ATGAAGTAATTGATATTCAAGTATTAAAACAATACGAGAGTAATGTATTAATGTTCCAAT ACATCTTTCTAGATGAAGATAATATCTTATCTTTGGTAGTAAAATATTAATACAAGAGTA GCAAAATCAACTGTGCTGTTCAGTGTTCCGAGTGTTAACATTACTCGCGCAATCTCACTG GAGTCAAACTTGTATAATGATGAGACAAACTGAGATCCTTAAGATAAATAGAGAAATCTG TGATAATGTGCCAATTTATCGAGAAGTTATCAATAGCTTCCTACTGCCTTCTCATATATG GACTATGGTTACTGGCAGAGGATTGGAAACAAAATCAGAACTACTTCTCGTGGTTACAAA TGCAGCTAGCTACCATTTGCATGTTAGTATGAAGCTGAATTGGAGGGAAATATGAATTTA AATTTGAATAGATAATGTAAGATCAGATCGATGTTATTCTTAACCTATTTCAACAGAACA TGTTAATATTTAGTCTTATCCTGTTTGTTGCTCTTTCTCTCGGGCTTTTCTGGATGTCGT CTGGTTTCACAGTAACTAGGTGCTTAGTATATGACTGACTTTTTATGGCTTATATAGTAA AACAATATTGAAACATGATTTCTTGGTACTATTTCAAGGGCATCTTTAAGGAGAATGTTT AAGACACATTAAGCCTGCAATGCAGAGTTGGTCCTACATCCATTAACCACCTCTTAATTC TGCTTCCCAATACTTTAATTTTGTGTGGACTATTGCCGCATTGCTTTGTTTGACAAAGTC CTGATAGGCTTAGAAATAACATGAATCCAATTTGGGGGTGTTATCAGGACATGCATAAAA ATACCCTTTAATTGCAGGAAAGGAAAACTGTTCTTATGCCCTAAATTGTTCTCGTCTTA