Transcript Data
Barley RTD
Links



Exon Structure of HORVU3Hr1G037940.6

ChromosomeExonStartStopDirection
chr3H1216303663216303522+
chr3H2216303945216303843+
chr3H3216305056216304557+


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7None-----
TAIR PP10None-----
BRACH PP3None-----




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (745 bp)

>HORVU3Hr1G037940.6 745 150831_barley_pseudomolecules
CTCAAAGCGCTGCGGCGGTTTCTCAAGGTGAGCTTCCTCGGAACGTGTTACGTGTTCTCC
GGTTCTTCCCCGAGCTAAGCTCGACCTCGCCCTCCCGTCCATTCCTAACACGCACCGGAT
ATCTCCTCCTGCCGAAGCGCATCTCGGGCATTCGGCGGACAGAGCGTTCCGGAACTGGTG
AGGCGAGGCCGCGGATAAGCACCAATTTGGTCGTCGGCGCTTCAGGGGTCTTTACCGATT
TATTGAGATGGTTGGAAAAGGAAGCTATGTTCCGCCGCAGTATGTTCCGTTATATGGTGT
AGATACTGAGGAGGATAGCGTTCCTGAGGTGGAGGAGAACATTGCCACGCGCCAAAGATT
AAGCAGGGATCCTACACAATGGTCTTCAGGCATCTGTGCTTGTTTTGATGATCCACAGAG
CTGTATGCTACTTTCTGACCCGTGACTCCTTGAATTACAGAAGGAAAGATAAAAGGTGCT
ATTTGGTTGCATGATAGGATAAAAAGTAAATCTTCAAACGGTACCTAGTAGCCTATTTAA
TATCTTCGTTTTTCTGTACCTAGTGGTGGTTAGTCTGATGTTCTCTTAGTCTTACTACAT
AGTGCATAAGGAAGTAGGAGCAAGTGCATAATACAGAGAGAAATTGTTCATAGTTATGAC
TCATGAGAAAAACTTCTTGCCTTTATTTTTTGAATTTCAGTAGTTGGTGGTGCTCTGAGT
TATATGTAGTTCTTGTAGAGACGGG