- Transcript HORVU1Hr1G073170.8
- Transcript IDHORVU1Hr1G073170.8
- Gene IDHORVU1Hr1G073170
Barley RTD
Exon Structure of HORVU1Hr1G073170.8
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr1H | 1 | 501617123 | 501616893 | - |
| chr1H | 2 | 501618080 | 501617276 | - |
| chr1H | 3 | 501619133 | 501618447 | - |
| chr1H | 4 | 501619606 | 501619229 | - |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (2101 bp)
>HORVU1Hr1G073170.8 2101 150831_barley_pseudomolecules TTCCCAGCCACAGTGCCGTGCTTTACCTTATCTGCCGCATTCCAACTCATGTTGTTATTC TGAGCAAAACTCGACTCGCTCGCTCGTCTCGACATCTGCACCGGATCGAGCTCAGCAAAG CCCGAGCCGGAGGCGCTCGTCTGCCCGGGGAGCGGCGCCATGCGGGTCCGCCTCTTCCTC TGAACCGGGCAAGCGCGAGCCGCCTTCTTCCTCCGGCTCGGCGTCGGCGGCGACGACGAG CGTCGGTGGCGGCATAGCACGGTCCAGCGACGAGCAGGTGATTCGGCGCCCAGCTCTGCT GCCGCGACGAGCGCTGAAGGCGGCTCTCCGTCTGTCTAATTTGACGCTCGATTTGCCTCA GGCCTGCACGGCTCAACTGATTTCATGTAGAGGAGGGCAATCTGTTCTCATCCCCTCGAC TTCCAGCAGAGCGTGCGAAGTCTCGTCCGCAGCAACGACGACGCCGGCTCAGGCAGCCGC GGGCACGGCAATGCCGGTTCCTCTTGCCCCTTACCCAACTCCTCCTGCGCCCTTCACGCC ACCCGCTCCCAATGCAGGTATGGTCGCCGACTGGGGGTACCGCAAGAACGGAGAAATCTT TGGCAATCATTCGATGCTCCCCCTTTTTCTGTTTTTTTTTATATAAATTTATTTCATGTT TCTTAGCCACCCAGAAAACCAAGATGTTAACGTTCTGGCTTCTTCATGATTTTTTTTTTC TTACGAAAAGTCTATCGGAACTGAATTTTCATGCTGCAGCTCCTTCTGCTGTTTTTAGTC TCCGAAGTTGTGATAGAACAGATTAAGCCCAAGATATCGATTAAGCCGTACATGTTTCTC TGCTGATTTTGCCCTTGCAATGCTTTTCTCAAATGTGACTTTTGGTTATTGGTAGGTGAG CTTCAGCCACTGAAATTTCATAACTAAGGTTCCATGCTTGAGCAATTTCAGGGGCTCAAA GCCAACTTGTCTGCTCTGGGTGCCGGAATCTGCTCATGTATCCTGCCGGCGCAACGTCGG TATGCTGCGCGGTTTGCAGTACCGTGACCGCTGTTCCGGCTCCTGGGACCGAGATGGCGC AGCTAGTTTGCGGAGGATGCCACACTCTTCTGATGTACATACGTGGTGCCACAAGTGTAC AGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTATGTAAAATTGACCAAAGC TTTTCTTTCTTCCTCTCTTCCTGGGTTGCAAGTGGTATATATGCCAGCCGGAGGCTGGAT CTTTCAAAAAAAAAAAGTGGTATATTCTGCTGGTTTTGATTCCCTTTCCGAAACGATGTG GACATTGATTTGTGTATGCAAAATCCTCCTTCTGGACAGAACGTATTCTGAGGTTGGAAA AGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGGCTTATCCTGAAGTCGCA CTCATCAAAATTGGACAGTAGGATGTATGCATTTGTTGTGATGCAGAAAACAAAAGGTTT GATAAGGATCTCCTGGATCTACCAAAAGTTTGATGCATATCTCCTAGTTTTTACTATAAG TCTGACAAACATGTCCTACAGTTACCGAATGATACACAAACACAAAGATTGAAAGATACC ACTAGCATTGGGTCCTGACTTCTGAAGATGCTCTACAGGTTCTAAGAACTCACAAGGATG AGTGCATAGAGTTGATGTGTGCTCATCAAATCTGAAATACTCTCAATGACAAATTTTATA TATCTTGTGCTTGGCCGCAGCGAATCAGGTTGCGCATGTAAACTGTGGGAGTTGCCGAAT GCTGCTCATGTACCAGTACGGCGCAAGGTCCGTCAAATGTGCAGTCTGCAGTTTCGTGAC ATCAGTTGGGGCATCATCGGGTGCAGAGCAGAAGCCCAGCAACTGAAATCCTGCAAGTTC ATTACGAAGGCAGCTTCCCGAAATAAGAATGCTTTGAGTGCACATGTATAGAGTTCTTCC CAGAAGCAACCTTTTCCTCCCCTCTCCATTTCTCCCTTCGTTGGACCTGGCGAGCTTGCG GAATAAACAAGAGTTTTTGGTAATACATAGTTGCTCAAAATTCGTCGAATCATCTGTGTA A