- Transcript HORVU1Hr1G073170.6
- Transcript IDHORVU1Hr1G073170.6
- Gene IDHORVU1Hr1G073170
Barley RTD
Exon Structure of HORVU1Hr1G073170.6
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr1H | 1 | 501617123 | 501616881 | - |
| chr1H | 2 | 501618080 | 501617276 | - |
| chr1H | 3 | 501618560 | 501618447 | - |
| chr1H | 4 | 501619133 | 501618955 | - |
| chr1H | 5 | 501619597 | 501619229 | - |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1710 bp)
>HORVU1Hr1G073170.6 1710 150831_barley_pseudomolecules ACAGTGCCGTGCTTTACCTTATCTGCCGCATTCCAACTCATGTTGTTATTCTGAGCAAAA CTCGACTCGCTCGCTCGTCTCGACATCTGCACCGGATCGAGCTCAGCAAAGCCCGAGCCG GAGGCGCTCGTCTGCCCGGGGAGCGGCGCCATGCGGGTCCGCCTCTTCCTCTGAACCGGG CAAGCGCGAGCCGCCTTCTTCCTCCGGCTCGGCGTCGGCGGCGACGACGAGCGTCGGTGG CGGCATAGCACGGTCCAGCGACGAGCAGGTGATTCGGCGCCCAGCTCTGCTGCCGCGACG AGCGCTGAAGGCGGCTCTCCGTCTGTCTAATTTGACGCTCGATTTGCCTCAGGCCTGCAC GGCTCAACTGATTTCATGTAGAGGAGGGCAATCTGTTCTCATCCCCTCGACTTCCAGCAG AGCGTGCGAAGTCTCGTCCGCAGCAACGACGACGCCGGCTCAGGCAGCCGCGGGCACGGC AATGCCGGTTCCTCTTGCCCCTTACCCAACTCCTCCTGCGCCCTTCACGCCACCCGCTCC CAATGCAGGGGCTCAAAGCCAACTTGTCTGCTCTGGGTGCCGGAATCTGCTCATGTATCC TGCCGGCGCAACGTCGGTATGCTGCGCGGTTTGCAGTACCGTGACCGCTGTTCCGGCTCC TGGGACCGAGATGGCGCAGCTAGTTTGCGGAGGATGCCACACTCTTCTGATGTACATACG TGGTGCCACAAGTGTACAGTGTTCTTGCTGCCACACTGTCAACCTGGCAATGGAAGGTAT GTAAAATTGACCAAAGCTTTTCTTTCTTCCTCTCTTCCTGGGTTGCAAGTGGTATATATG CCAGCCGGAGGCTGGATCTTTCAAAAAAAAAAAGTGGTATATTCTGCTGGTTTTGATTCC CTTTCCGAAACGATGTGGACATTGATTTGTGTATGCAAAATCCTCCTTCTGGACAGAACG TATTCTGAGGTTGGAAAAGCTCTAGCAATCAGTCGATAACCGTTAACATCGTAAAATTGG CTTATCCTGAAGTCGCACTCATCAAAATTGGACAGTAGGATGTATGCATTTGTTGTGATG CAGAAAACAAAAGGTTTGATAAGGATCTCCTGGATCTACCAAAAGTTTGATGCATATCTC CTAGTTTTTACTATAAGTCTGACAAACATGTCCTACAGTTACCGAATGATACACAAACAC AAAGATTGAAAGATACCACTAGCATTGGGTCCTGACTTCTGAAGATGCTCTACAGGTTCT AAGAACTCACAAGGATGAGTGCATAGAGTTGATGTGTGCTCATCAAATCTGAAATACTCT CAATGACAAATTTTATATATCTTGTGCTTGGCCGCAGCGAATCAGGTTGCGCATGTAAAC TGTGGGAGTTGCCGAATGCTGCTCATGTACCAGTACGGCGCAAGGTCCGTCAAATGTGCA GTCTGCAGTTTCGTGACATCAGTTGGGGCATCATCGGGTGCAGAGCAGAAGCCCAGCAAC TGAAATCCTGCAAGTTCATTACGAAGGCAGCTTCCCGAAATAAGAATGCTTTGAGTGCAC ATGTATAGAGTTCTTCCCAGAAGCAACCTTTTCCTCCCCTCTCCATTTCTCCCTTCGTTG GACCTGGCGAGCTTGCGGAATAAACAAGAGTTTTTGGTAATACATAGTTGCTCAAAATTC GTCGAATCATCTGTGTAACTGGGTCAGACA