Probe CUST_9442_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_9442_PI426222305 | JHI_St_60k_v1 | DMT400058916 | GAGTACTACTTACTCATGTTGCAAGGTAAAGTTTTCCAAGCTTGGTTCTAATATGCATTA |
All Microarray Probes Designed to Gene DMG400022888
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_9269_PI426222305 | JHI_St_60k_v1 | DMT400058918 | CTCAATTTCAAGTTATAGCCAAAACTCCACTCTCGCAGTTGGAATTCCATAAGCTTTTTT |
| CUST_9442_PI426222305 | JHI_St_60k_v1 | DMT400058916 | GAGTACTACTTACTCATGTTGCAAGGTAAAGTTTTCCAAGCTTGGTTCTAATATGCATTA |
| CUST_9368_PI426222305 | JHI_St_60k_v1 | DMT400058917 | GCGGAATCTAAATTTGTGGCTATACCAAAACTTTTTTCCTAACAACTTCTGAGGTTGTTT |
Microarray Signals from CUST_9442_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 389.468 | 91.3784 | 1.47574 | 0.256813 |
| ABA 1h | 209.972 | 44.1867 | 0.898476 | 0.179712 |
| ACC 1h | 317.989 | 86.3793 | 1.12899 | 0.283683 |
| BABA 1h | 410.562 | 87.384 | 1.61171 | 0.220931 |
| Chitin 1h | 298.116 | 17.5074 | 1.31956 | 0.123738 |
| Epi 1h | 330.078 | 19.8953 | 1.51424 | 0.092566 |
| SA 1h | 420.743 | 33.2811 | 1.62248 | 0.159082 |
| Me-JA 1h | 826.532 | 142.966 | 3.92191 | 0.331133 |
| Control 6h | 159.256 | 39.8216 | 0.584658 | 0.12192 |
| ABA 6h | 68.8938 | 11.2688 | 0.25147 | 0.0271291 |
| ACC 6h | 69.801 | 8.89524 | 0.238225 | 0.0432209 |
| BABA 6h | 131.899 | 25.9224 | 0.4505 | 0.0767319 |
| Chitin 6h | 108.382 | 8.64184 | 0.403262 | 0.0415818 |
| Epi 6h | 81.9399 | 26.8976 | 0.253771 | 0.126297 |
| SA 6h | 79.3656 | 19.5303 | 0.302605 | 0.0641665 |
| Me-JA 6h | 333.335 | 38.1422 | 1.31672 | 0.129662 |
Source Transcript PGSC0003DMT400058916 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G19180.1 | +3 | 5e-17 | 81 | 58/164 (35%) | jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |