Probe CUST_8297_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_8297_PI426222305 | JHI_St_60k_v1 | DMT400030201 | CGAGGATAAAGAATTCTGTTGTGAAGAAAATGGCAACTTCTTATATACTTCTGAGACTGA |
All Microarray Probes Designed to Gene DMG401011556
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_8155_PI426222305 | JHI_St_60k_v1 | DMT400030200 | CGAGGATAAAGAATTCTGTTGTGAAGAAAATGGCAACTTCTTATATACTTCTGAGACTGA |
| CUST_8297_PI426222305 | JHI_St_60k_v1 | DMT400030201 | CGAGGATAAAGAATTCTGTTGTGAAGAAAATGGCAACTTCTTATATACTTCTGAGACTGA |
Microarray Signals from CUST_8297_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 20.6533 | 3.15385 | 1.28308 | 0.204737 |
| ABA 1h | 14.3198 | 4.35405 | 0.940945 | 0.348242 |
| ACC 1h | 22.9284 | 3.56141 | 1.40186 | 0.218703 |
| BABA 1h | 9.40415 | 3.74422 | 0.533545 | 0.230971 |
| Chitin 1h | 16.0716 | 3.83924 | 1.04925 | 0.239157 |
| Epi 1h | 10.8818 | 2.95298 | 0.755134 | 0.233988 |
| SA 1h | 5.73518 | 2.93959 | 0.348493 | 0.183259 |
| Me-JA 1h | 5.09436 | 2.96555 | 0.404884 | 0.2278 |
| Control 6h | 28.8016 | 9.04832 | 1.56774 | 0.548593 |
| ABA 6h | 35.0498 | 6.55303 | 2.01461 | 0.299466 |
| ACC 6h | 16.0371 | 4.7427 | 0.79738 | 0.213104 |
| BABA 6h | 18.7975 | 5.37404 | 0.968253 | 0.347578 |
| Chitin 6h | 21.4359 | 5.4816 | 1.19876 | 0.257489 |
| Epi 6h | 11.3503 | 3.51852 | 0.632534 | 0.197972 |
| SA 6h | 29.9507 | 8.49127 | 1.77822 | 0.76245 |
| Me-JA 6h | 15.1451 | 4.99729 | 0.814628 | 0.439454 |
Source Transcript PGSC0003DMT400030201 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G33800.1 | +2 | 9e-10 | 58 | 55/165 (33%) | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16210404-16211307 REVERSE LENGTH=170 |