Probe CUST_704_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_704_PI426222305 | JHI_St_60k_v1 | DMT400055121 | CCACAAACATACCCTTACTTTTTATCCTTTCTTTCCTGGGTCGATTTGAGTCGGTTATTA |
All Microarray Probes Designed to Gene DMG400021389
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_704_PI426222305 | JHI_St_60k_v1 | DMT400055121 | CCACAAACATACCCTTACTTTTTATCCTTTCTTTCCTGGGTCGATTTGAGTCGGTTATTA |
Microarray Signals from CUST_704_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 2304.76 | 355.603 | 1.94792 | 0.174691 |
| ABA 1h | 1078.05 | 104.377 | 1.04369 | 0.132561 |
| ACC 1h | 2025.39 | 261.869 | 1.6766 | 0.152766 |
| BABA 1h | 1518.96 | 384.031 | 1.25127 | 0.262263 |
| Chitin 1h | 1384.77 | 139.054 | 1.31626 | 0.0849429 |
| Epi 1h | 1368.49 | 103.698 | 1.35792 | 0.0856341 |
| SA 1h | 1416.33 | 267.741 | 1.14535 | 0.164831 |
| Me-JA 1h | 1067 | 143.023 | 1.10935 | 0.0641384 |
| Control 6h | 1299.61 | 224.238 | 1.08553 | 0.120697 |
| ABA 6h | 393.454 | 49.3549 | 0.314328 | 0.0267627 |
| ACC 6h | 1145.64 | 164.404 | 0.843989 | 0.0713592 |
| BABA 6h | 855.748 | 121.384 | 0.646921 | 0.109518 |
| Chitin 6h | 970.941 | 206.833 | 0.754132 | 0.136317 |
| Epi 6h | 992.525 | 123.813 | 0.747687 | 0.0595492 |
| SA 6h | 832.746 | 76.2721 | 0.720929 | 0.0417329 |
| Me-JA 6h | 806.393 | 113.328 | 0.686711 | 0.0449598 |
Source Transcript PGSC0003DMT400055121 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc05g018820.1 | +1 | 2e-69 | 216 | 144/202 (71%) | evidence_code:10F0H0E0IEG genomic_reference:SL2.50ch05 gene_region:23992305-23992874 transcript_region:SL2.50ch05:23992305..23992874- functional_description:Genomic DNA chromosome 5 P1 clone MHM17 (AHRD V1 **-- Q9FGR3_ARATH) |
| TAIR PP10 | AT5G56980.1 | +1 | 2e-16 | 78 | 61/142 (43%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23056574-23057713 REVERSE LENGTH=379 |