Probe CUST_4942_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_4942_PI426222305 | JHI_St_60k_v1 | DMT400009408 | CAGTTATTGCCTTTCCTGTATATGTACTAAATACTGTCTCCTATGCAGAATCAACTAATG |
All Microarray Probes Designed to Gene DMG400003656
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_4942_PI426222305 | JHI_St_60k_v1 | DMT400009408 | CAGTTATTGCCTTTCCTGTATATGTACTAAATACTGTCTCCTATGCAGAATCAACTAATG |
| CUST_5449_PI426222305 | JHI_St_60k_v1 | DMT400009410 | GATATGAGTCCTGATGCAAATACTAGCTTGATTCCTAGTTTAAGCCTAACTATGAGTGGG |
| CUST_4967_PI426222305 | JHI_St_60k_v1 | DMT400009411 | TGTACCTTATGATTGCAATAGAACAGTGAGATTGTATAGTGCCACCTTGTTCCACAGCCA |
Microarray Signals from CUST_4942_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 7.24059 | 3.78035 | 1.0189 | 0.544607 |
| ABA 1h | 6.07034 | 3.52231 | 0.990963 | 0.574763 |
| ACC 1h | 7.68914 | 4.52352 | 1.0655 | 0.617002 |
| BABA 1h | 7.53155 | 3.91251 | 1.12162 | 0.588059 |
| Chitin 1h | 6.27452 | 3.6569 | 1.00152 | 0.579966 |
| Epi 1h | 6.20585 | 3.62368 | 1.02728 | 0.595138 |
| SA 1h | 6.29938 | 3.65683 | 0.88377 | 0.511778 |
| Me-JA 1h | 6.53616 | 3.81887 | 1.14665 | 0.663928 |
| Control 6h | 6.75747 | 3.92154 | 0.971869 | 0.562804 |
| ABA 6h | 7.34093 | 4.13579 | 0.99356 | 0.560918 |
| ACC 6h | 7.59263 | 4.48103 | 0.938761 | 0.543608 |
| BABA 6h | 7.52833 | 4.38494 | 0.966144 | 0.559475 |
| Chitin 6h | 7.65921 | 4.4517 | 1.0356 | 0.599639 |
| Epi 6h | 8.72572 | 4.76422 | 1.09972 | 0.584939 |
| SA 6h | 7.19313 | 4.1684 | 1.04979 | 0.607916 |
| Me-JA 6h | 6.75008 | 3.9112 | 0.978626 | 0.566683 |
Source Transcript PGSC0003DMT400009408 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G35880.1 | +3 | 4e-27 | 89 | 39/55 (71%) | Eukaryotic aspartyl protease family protein | chr4:16993339-16995721 FORWARD LENGTH=524 |