Probe CUST_47006_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_47006_PI426222305 | JHI_St_60k_v1 | DMT400068940 | ATTTGGGGGAATTTTGCTTGTTTCATTGGGAAATCATCAACAGGTCATGACTACTCTACT |
All Microarray Probes Designed to Gene DMG400026814
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_47003_PI426222305 | JHI_St_60k_v1 | DMT400068938 | TCACTCTAACTACTGCAGGGTAACTTTTGTTATATTCTTTGTACTCCAAAACCCTTTAGA |
| CUST_47014_PI426222305 | JHI_St_60k_v1 | DMT400068937 | TTTAGTTCCTATAACTTAGAAGTCTCATCACTGCACTCACTGGCCACTGCTCACATTTTA |
| CUST_47015_PI426222305 | JHI_St_60k_v1 | DMT400068939 | ATCAGAACTCTGCTCAAGTTCTCACGATTTATCATTCTCTGCTACAGTAACTTTTGTTAT |
| CUST_47006_PI426222305 | JHI_St_60k_v1 | DMT400068940 | ATTTGGGGGAATTTTGCTTGTTTCATTGGGAAATCATCAACAGGTCATGACTACTCTACT |
Microarray Signals from CUST_47006_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 83.2777 | 7.21335 | 1.21003 | 0.125468 |
| ABA 1h | 66.6553 | 15.0772 | 1.0515 | 0.232237 |
| ACC 1h | 60.3856 | 20.1269 | 0.770971 | 0.226928 |
| BABA 1h | 65.0131 | 15.3244 | 0.927586 | 0.153183 |
| Chitin 1h | 54.856 | 4.8914 | 0.886158 | 0.145728 |
| Epi 1h | 57.2602 | 9.1897 | 0.940226 | 0.157946 |
| SA 1h | 50.5783 | 4.61878 | 0.714176 | 0.111672 |
| Me-JA 1h | 44.2228 | 8.82845 | 0.763366 | 0.112592 |
| Control 6h | 120.527 | 12.4654 | 1.73987 | 0.114874 |
| ABA 6h | 121.945 | 22.708 | 1.61594 | 0.239599 |
| ACC 6h | 79.8175 | 7.75189 | 1.00824 | 0.171617 |
| BABA 6h | 110.353 | 20.395 | 1.38633 | 0.236397 |
| Chitin 6h | 95.2593 | 13.2462 | 1.282 | 0.188562 |
| Epi 6h | 89.7195 | 19.5203 | 1.11492 | 0.252951 |
| SA 6h | 42.6899 | 5.29702 | 0.621428 | 0.0722269 |
| Me-JA 6h | 117.383 | 38.6032 | 1.5052 | 0.494439 |
Source Transcript PGSC0003DMT400068940 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G12650.1 | -1 | 4e-43 | 146 | 79/159 (50%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | chr1:4306183-4307673 FORWARD LENGTH=248 |