Probe CUST_43654_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_43654_PI426222305 | JHI_St_60k_v1 | DMT400030795 | CTGCATAGATAGAGTTGTCAAAAGAGACGTTTAGTTTTACATATCCTTTGATTGACCTGA |
All Microarray Probes Designed to Gene DMG400011798
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_43654_PI426222305 | JHI_St_60k_v1 | DMT400030795 | CTGCATAGATAGAGTTGTCAAAAGAGACGTTTAGTTTTACATATCCTTTGATTGACCTGA |
| CUST_43660_PI426222305 | JHI_St_60k_v1 | DMT400030796 | ATGGTTTCAGCTAGAGGCTCTCATGTGACTAATCCTGGTATTGAGTCCGATGACGATGAT |
Microarray Signals from CUST_43654_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.54816 | 3.2206 | 0.76081 | 0.441072 |
| ABA 1h | 6.15391 | 3.15508 | 0.947149 | 0.491591 |
| ACC 1h | 8.38057 | 3.56112 | 1.05113 | 0.50982 |
| BABA 1h | 7.8329 | 3.44151 | 1.08297 | 0.498341 |
| Chitin 1h | 6.62587 | 3.32184 | 1.00347 | 0.505058 |
| Epi 1h | 8.16156 | 3.22249 | 1.19734 | 0.566779 |
| SA 1h | 6.19163 | 3.21482 | 0.820831 | 0.43357 |
| Me-JA 1h | 5.75246 | 3.35078 | 0.962682 | 0.55793 |
| Control 6h | 7.02216 | 3.50711 | 0.950167 | 0.489723 |
| ABA 6h | 24.5087 | 4.32457 | 3.05206 | 0.52042 |
| ACC 6h | 8.5757 | 4.1411 | 0.940565 | 0.483802 |
| BABA 6h | 15.1961 | 4.14301 | 1.70899 | 0.534374 |
| Chitin 6h | 10.6733 | 4.29603 | 1.18914 | 0.557918 |
| Epi 6h | 10.8729 | 3.99275 | 1.1648 | 0.544425 |
| SA 6h | 8.09759 | 3.64073 | 1.09527 | 0.521001 |
| Me-JA 6h | 8.59112 | 3.51422 | 1.18318 | 0.483144 |
Source Transcript PGSC0003DMT400030795 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G01015.1 | +3 | 3e-20 | 86 | 36/70 (51%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5335-5769 REVERSE LENGTH=104 |