Probe CUST_40608_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_40608_PI426222305 | JHI_St_60k_v1 | DMT400073980 | TCGGAGAAGTGAGTCTGATCTACAAGAAAAAATTTAGGTGTGAAGTTTGTATAGCTCATG |
All Microarray Probes Designed to Gene DMG400028750
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_40608_PI426222305 | JHI_St_60k_v1 | DMT400073980 | TCGGAGAAGTGAGTCTGATCTACAAGAAAAAATTTAGGTGTGAAGTTTGTATAGCTCATG |
Microarray Signals from CUST_40608_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 39.8632 | 9.55582 | 1.03028 | 0.192823 |
| ABA 1h | 5.50745 | 3.06027 | 0.170845 | 0.0949799 |
| ACC 1h | 59.2309 | 20.0231 | 1.38249 | 0.473087 |
| BABA 1h | 86.4871 | 30.2809 | 2.01434 | 0.897418 |
| Chitin 1h | 51.1633 | 16.4997 | 1.40747 | 0.35849 |
| Epi 1h | 64.543 | 4.84783 | 2.04717 | 0.153801 |
| SA 1h | 55.8502 | 11.0885 | 1.42688 | 0.231552 |
| Me-JA 1h | 59.7777 | 19.0513 | 1.83113 | 0.455221 |
| Control 6h | 21.7108 | 3.98319 | 0.576121 | 0.103919 |
| ABA 6h | 10.4177 | 4.40448 | 0.228609 | 0.103567 |
| ACC 6h | 41.1342 | 4.64407 | 0.983502 | 0.155038 |
| BABA 6h | 28.0631 | 7.96693 | 0.619054 | 0.20432 |
| Chitin 6h | 32.0926 | 14.07 | 0.69274 | 0.298065 |
| Epi 6h | 33.8854 | 4.2741 | 0.824198 | 0.103412 |
| SA 6h | 36.7326 | 11.7085 | 0.878697 | 0.283164 |
| Me-JA 6h | 39.5295 | 4.05692 | 1.08759 | 0.111936 |
Source Transcript PGSC0003DMT400073980 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G29195.1 | +3 | 5e-06 | 46 | 41/173 (24%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:10202673-10203254 REVERSE LENGTH=193 |