Probe CUST_37705_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37705_PI426222305 | JHI_St_60k_v1 | DMT400053645 | TGGGCTATTGCTATTCTATCCCTGCCTATACGGAGTTTAACAGCTCTACAAAGGGAAAGG |
All Microarray Probes Designed to Gene DMG400020810
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_37721_PI426222305 | JHI_St_60k_v1 | DMT400053646 | GTATAATATCCGTCTTTTATTAGTTCTCCAGCTACTGATGACACCATTACCTATTGAGTT |
| CUST_37705_PI426222305 | JHI_St_60k_v1 | DMT400053645 | TGGGCTATTGCTATTCTATCCCTGCCTATACGGAGTTTAACAGCTCTACAAAGGGAAAGG |
Microarray Signals from CUST_37705_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 14.1352 | 4.83592 | 1.96788 | 0.850737 |
| ABA 1h | 7.74224 | 2.74929 | 1.34417 | 0.543098 |
| ACC 1h | 5.36186 | 3.11497 | 0.846555 | 0.490428 |
| BABA 1h | 6.15421 | 3.00035 | 1.02048 | 0.517418 |
| Chitin 1h | 6.55241 | 2.84867 | 1.16768 | 0.537732 |
| Epi 1h | 4.97921 | 2.82481 | 0.949423 | 0.529505 |
| SA 1h | 4.90997 | 2.84461 | 0.791284 | 0.450152 |
| Me-JA 1h | 4.96926 | 2.88619 | 1.02891 | 0.571542 |
| Control 6h | 5.15929 | 2.91252 | 0.836672 | 0.472615 |
| ABA 6h | 61.0024 | 10.4759 | 9.05151 | 1.40199 |
| ACC 6h | 6.20192 | 3.54492 | 0.864362 | 0.482033 |
| BABA 6h | 11.0852 | 3.35157 | 1.50206 | 0.547796 |
| Chitin 6h | 10.6195 | 3.29788 | 1.56309 | 0.529796 |
| Epi 6h | 5.7776 | 3.37441 | 0.826706 | 0.479205 |
| SA 6h | 9.42277 | 3.19279 | 1.386 | 0.578477 |
| Me-JA 6h | 9.45534 | 2.96086 | 1.44901 | 0.540655 |
Source Transcript PGSC0003DMT400053645 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G45310.1 | +1 | 6e-59 | 205 | 136/334 (41%) | unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: stem, inflorescence meristem, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:18359373-18360796 REVERSE LENGTH=352 |