Probe CUST_3705_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3705_PI426222305 | JHI_St_60k_v1 | DMT400010248 | CCTCTTAACAATATGCATGATGCCCAACATTTTAACAAGGTATGCGACATAATTAATCAC |
All Microarray Probes Designed to Gene DMG400004010
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3511_PI426222305 | JHI_St_60k_v1 | DMT400010250 | GGACAGTGAAGATTCATAATATAGTTGATCTTACCTTACTCGACATTGAGCCATTATAAC |
| CUST_3705_PI426222305 | JHI_St_60k_v1 | DMT400010248 | CCTCTTAACAATATGCATGATGCCCAACATTTTAACAAGGTATGCGACATAATTAATCAC |
| CUST_3605_PI426222305 | JHI_St_60k_v1 | DMT400010247 | AATATGCATGATGCCCAACATTTTAACAAGTGTCGCACAGATGCAACAACAATTAAGAAC |
| CUST_3512_PI426222305 | JHI_St_60k_v1 | DMT400010249 | GCGATATGGACAGTGAAGATTCATAATATAGTTGATCTTACCTTACTCGACATTGAGCCA |
Microarray Signals from CUST_3705_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 87.4714 | 66.9175 | 2.09508 | 2.44827 |
| ABA 1h | 44.9607 | 5.86789 | 2.30892 | 0.282079 |
| ACC 1h | 17.362 | 4.9581 | 0.696901 | 0.235248 |
| BABA 1h | 30.0596 | 4.19062 | 1.42271 | 0.204106 |
| Chitin 1h | 22.2545 | 3.7798 | 1.12409 | 0.195055 |
| Epi 1h | 20.6097 | 3.72396 | 1.06381 | 0.211815 |
| SA 1h | 26.5897 | 9.68086 | 1.04519 | 0.393866 |
| Me-JA 1h | 30.203 | 8.75253 | 1.52096 | 0.625255 |
| Control 6h | 19.1343 | 3.92798 | 0.851821 | 0.188735 |
| ABA 6h | 76.8722 | 5.92299 | 3.32137 | 0.256766 |
| ACC 6h | 15.0682 | 4.6773 | 0.602751 | 0.182439 |
| BABA 6h | 15.3685 | 8.09255 | 0.489707 | 0.26605 |
| Chitin 6h | 18.0236 | 4.21333 | 0.759936 | 0.190194 |
| Epi 6h | 15.4327 | 4.43701 | 0.594586 | 0.187647 |
| SA 6h | 16.6975 | 5.27039 | 0.677389 | 0.370347 |
| Me-JA 6h | 36.2213 | 7.64098 | 1.59332 | 0.523887 |
Source Transcript PGSC0003DMT400010248 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G58450.1 | +1 | 1e-11 | 66 | 37/68 (54%) | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:23626826-23632071 FORWARD LENGTH=1065 |