Probe CUST_35076_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_35076_PI426222305 | JHI_St_60k_v1 | DMT400049987 | CCGAGGCGGATTCAGGAGTTCAAATTTAATGGATTCAATGTTTAAGATTCTCATCAATGA |
All Microarray Probes Designed to Gene DMG400019420
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_35076_PI426222305 | JHI_St_60k_v1 | DMT400049987 | CCGAGGCGGATTCAGGAGTTCAAATTTAATGGATTCAATGTTTAAGATTCTCATCAATGA |
Microarray Signals from CUST_35076_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.26965 | 3.06076 | 0.593373 | 0.34141 |
| ABA 1h | 5.03559 | 2.91724 | 0.642503 | 0.368629 |
| ACC 1h | 7.88569 | 3.61328 | 0.829248 | 0.406649 |
| BABA 1h | 5.68254 | 3.24888 | 0.658742 | 0.375734 |
| Chitin 1h | 7.25747 | 3.06898 | 0.843147 | 0.39693 |
| Epi 1h | 6.12274 | 3.00549 | 0.788153 | 0.390136 |
| SA 1h | 5.29243 | 3.06657 | 0.576093 | 0.333689 |
| Me-JA 1h | 7.4513 | 3.1317 | 0.959732 | 0.460367 |
| Control 6h | 18.2427 | 5.77195 | 1.7916 | 0.562741 |
| ABA 6h | 149.112 | 97.9594 | 9.96716 | 10.6177 |
| ACC 6h | 77.4809 | 7.35938 | 7.48848 | 0.556133 |
| BABA 6h | 33.3978 | 18.5631 | 2.44702 | 1.54689 |
| Chitin 6h | 42.8221 | 14.3933 | 3.85389 | 2.02917 |
| Epi 6h | 53.1304 | 15.825 | 4.85844 | 1.35958 |
| SA 6h | 34.449 | 7.20717 | 3.72497 | 1.30797 |
| Me-JA 6h | 6.17856 | 3.10874 | 0.68914 | 0.351033 |
Source Transcript PGSC0003DMT400049987 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G52900.1 | +2 | 2e-13 | 68 | 69/234 (29%) | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21452893-21453692 REVERSE LENGTH=235 |