Probe CUST_34760_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_34760_PI426222305 | JHI_St_60k_v1 | DMT400009732 | TTGGATACAGTAGTAGAGTGTGACTTTCATTTTCAACTGAATGCTCTTCTACCCTGTTTT |
All Microarray Probes Designed to Gene DMG400003808
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_34760_PI426222305 | JHI_St_60k_v1 | DMT400009732 | TTGGATACAGTAGTAGAGTGTGACTTTCATTTTCAACTGAATGCTCTTCTACCCTGTTTT |
Microarray Signals from CUST_34760_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 7.06846 | 3.18573 | 0.542915 | 0.269046 |
| ABA 1h | 22.045 | 3.40834 | 1.96496 | 0.420992 |
| ACC 1h | 6.62179 | 3.4715 | 0.516432 | 0.275136 |
| BABA 1h | 11.7099 | 3.43456 | 0.898206 | 0.328423 |
| Chitin 1h | 7.071 | 3.17557 | 0.61505 | 0.300892 |
| Epi 1h | 17.97 | 3.30179 | 1.64379 | 0.32493 |
| SA 1h | 5.55794 | 3.1326 | 0.437119 | 0.246507 |
| Me-JA 1h | 10.5663 | 3.64076 | 0.929615 | 0.357546 |
| Control 6h | 21.2701 | 6.45939 | 1.53081 | 0.41815 |
| ABA 6h | 41.3767 | 13.449 | 2.6829 | 1.17533 |
| ACC 6h | 12.9881 | 4.02321 | 0.882913 | 0.318001 |
| BABA 6h | 16.31 | 5.18266 | 1.04061 | 0.383971 |
| Chitin 6h | 14.2672 | 4.31799 | 0.956714 | 0.411779 |
| Epi 6h | 8.91749 | 3.76581 | 0.616006 | 0.272858 |
| SA 6h | 25.7339 | 16.9103 | 1.31089 | 1.84907 |
| Me-JA 6h | 23.6725 | 7.97551 | 1.6302 | 0.646384 |
Source Transcript PGSC0003DMT400009732 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G48060.1 | +1 | 7e-16 | 76 | 46/108 (43%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). | chr2:19651560-19662386 REVERSE LENGTH=2462 |