Probe CUST_34279_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_34279_PI426222305 | JHI_St_60k_v1 | DMT400044868 | TGTGATCTATGTAGGTGAATCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT |
All Microarray Probes Designed to Gene DMG402017409
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_34254_PI426222305 | JHI_St_60k_v1 | DMT400044869 | TGTGATCTATGTAGGTGAATCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT |
| CUST_34279_PI426222305 | JHI_St_60k_v1 | DMT400044868 | TGTGATCTATGTAGGTGAATCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT |
| CUST_34268_PI426222305 | JHI_St_60k_v1 | DMT400044863 | TGTGATCTATGTAGGTGAATCTTTTTGGCCAAAGAATATACTTGTAACGCGATTCCATTT |
Microarray Signals from CUST_34279_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 108.032 | 13.2878 | 1.7938 | 0.117203 |
| ABA 1h | 68.3802 | 4.99161 | 1.30168 | 0.0994061 |
| ACC 1h | 60.4174 | 12.1211 | 0.944095 | 0.143365 |
| BABA 1h | 63.0984 | 8.51859 | 1.08023 | 0.087248 |
| Chitin 1h | 44.096 | 4.21135 | 0.817854 | 0.144419 |
| Epi 1h | 43.2238 | 4.23184 | 0.832673 | 0.0789886 |
| SA 1h | 55.5835 | 4.52303 | 0.905229 | 0.1326 |
| Me-JA 1h | 27.5065 | 3.62344 | 0.561293 | 0.0745968 |
| Control 6h | 64.0877 | 14.6666 | 1.00804 | 0.18397 |
| ABA 6h | 61.0372 | 11.5462 | 0.926288 | 0.163367 |
| ACC 6h | 54.8834 | 5.12936 | 0.801734 | 0.082577 |
| BABA 6h | 65.2011 | 16.6423 | 0.89975 | 0.262916 |
| Chitin 6h | 72.5218 | 15.2919 | 1.08684 | 0.282654 |
| Epi 6h | 66.0559 | 9.68707 | 0.966678 | 0.169401 |
| SA 6h | 38.1583 | 14.3379 | 0.571438 | 0.175102 |
| Me-JA 6h | 52.3057 | 11.8777 | 0.837572 | 0.129367 |
Source Transcript PGSC0003DMT400044868 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G13224.2 | +2 | 3e-75 | 251 | 126/182 (69%) | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:4254848-4256621 FORWARD LENGTH=358 |