Probe CUST_30379_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_30379_PI426222305 | JHI_St_60k_v1 | DMT400069892 | CGTGTTTAGGGTACTGTGTGATAAATTGTTTAACCAAGATTTAAAGGTAAGCTCTACGTT |
All Microarray Probes Designed to Gene DMG400027178
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_30366_PI426222305 | JHI_St_60k_v1 | DMT400069893 | CGTGTTTAGGGTACTGTGTGATAAATTGTTTAACCAAGATTTAAAGGTAAGCTCTACGTT |
| CUST_30379_PI426222305 | JHI_St_60k_v1 | DMT400069892 | CGTGTTTAGGGTACTGTGTGATAAATTGTTTAACCAAGATTTAAAGGTAAGCTCTACGTT |
| CUST_30402_PI426222305 | JHI_St_60k_v1 | DMT400069890 | CGTGTTTAGGGTACTGTGTGATAAATTGTTTAACCAAGATTTAAAGGTAAGCTCTACGTT |
Microarray Signals from CUST_30379_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 245.639 | 24.7044 | 0.866186 | 0.0510927 |
| ABA 1h | 245.811 | 16.8803 | 0.985644 | 0.0580248 |
| ACC 1h | 167.046 | 40.5377 | 0.537115 | 0.119178 |
| BABA 1h | 216.01 | 51.5626 | 0.751368 | 0.122869 |
| Chitin 1h | 226.231 | 34.3606 | 0.875185 | 0.113842 |
| Epi 1h | 208.908 | 21.5458 | 0.850627 | 0.0718165 |
| SA 1h | 224.924 | 24.8316 | 0.769849 | 0.0527425 |
| Me-JA 1h | 92.5956 | 16.4272 | 0.39254 | 0.043684 |
| Control 6h | 597.872 | 110.852 | 2.04063 | 0.24363 |
| ABA 6h | 375.398 | 57.2991 | 1.22996 | 0.116543 |
| ACC 6h | 537.564 | 68.4581 | 1.64196 | 0.103209 |
| BABA 6h | 420.961 | 31.5845 | 1.33221 | 0.077671 |
| Chitin 6h | 409.819 | 23.9638 | 1.36765 | 0.0797513 |
| Epi 6h | 488.74 | 59.2653 | 1.52308 | 0.226271 |
| SA 6h | 374.771 | 99.6254 | 1.23336 | 0.254688 |
| Me-JA 6h | 281.904 | 71.1338 | 0.945467 | 0.165532 |
Source Transcript PGSC0003DMT400069892 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G39950.1 | +1 | 2e-76 | 263 | 185/438 (42%) | unknown protein; Has 978 Blast hits to 254 proteins in 81 species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi - 53; Plants - 41; Viruses - 0; Other Eukaryotes - 767 (source: NCBI BLink). | chr2:16676758-16680204 REVERSE LENGTH=636 |