Probe CUST_28385_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_28385_PI426222305 | JHI_St_60k_v1 | DMT400044408 | CGTAGTCAGAATTTGTGATTCGCTGGACAATAATGTCATCTTTCCTATTCTGTTGTATAT |
All Microarray Probes Designed to Gene DMG402017239
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_28389_PI426222305 | JHI_St_60k_v1 | DMT400044406 | TTGTTAATATTGGTGACCTTCTTCAGATCCTATCAAATGACAAGTTTGTAAGTGCAACTC |
| CUST_28288_PI426222305 | JHI_St_60k_v1 | DMT400044407 | TTGTTATTATTGGTGATCTCCTTCAGATCCTATCAAATGACAAGTTTGTAAGTGCAACTC |
| CUST_28295_PI426222305 | JHI_St_60k_v1 | DMT400044411 | ATTCATAGAGTTGTAGCGAAAAAGATAGGACCAAGGATTTCAGTGGCATGCTTTTCAACG |
| CUST_28257_PI426222305 | JHI_St_60k_v1 | DMT400044410 | CGTAGTCAGAATTTGTGATTCGCTGGACAATAATGTCATCTTTCCTATTCTGTTGTATAT |
| CUST_28271_PI426222305 | JHI_St_60k_v1 | DMT400044405 | AACCTGAAGAAATACCACAAGTTTGCAGGTAACTCTGTATTTTCTGCACTTGAATTTCAA |
| CUST_28385_PI426222305 | JHI_St_60k_v1 | DMT400044408 | CGTAGTCAGAATTTGTGATTCGCTGGACAATAATGTCATCTTTCCTATTCTGTTGTATAT |
Microarray Signals from CUST_28385_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.84487 | 3.3881 | 0.910726 | 0.527463 |
| ABA 1h | 5.7896 | 3.35683 | 1.01976 | 0.590704 |
| ACC 1h | 6.5143 | 3.77448 | 0.988703 | 0.572532 |
| BABA 1h | 6.29863 | 3.65901 | 1.01626 | 0.588693 |
| Chitin 1h | 6.06402 | 3.53232 | 1.04551 | 0.605471 |
| Epi 1h | 5.8383 | 3.3936 | 1.04902 | 0.608249 |
| SA 1h | 6.24211 | 3.4515 | 0.941457 | 0.523421 |
| Me-JA 1h | 6.1851 | 3.59853 | 1.17608 | 0.680968 |
| Control 6h | 6.87176 | 3.74203 | 1.06272 | 0.58297 |
| ABA 6h | 8.1378 | 3.81282 | 1.15828 | 0.579774 |
| ACC 6h | 7.40929 | 4.39193 | 0.985545 | 0.571185 |
| BABA 6h | 7.1687 | 4.16862 | 0.994741 | 0.576043 |
| Chitin 6h | 7.00408 | 4.06148 | 1.02565 | 0.594411 |
| Epi 6h | 7.15851 | 4.19508 | 0.978757 | 0.566755 |
| SA 6h | 7.93417 | 3.8982 | 1.22231 | 0.628277 |
| Me-JA 6h | 6.4802 | 3.75712 | 1.01363 | 0.58695 |
Source Transcript PGSC0003DMT400044408 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G06620.1 | +3 | 2e-106 | 322 | 178/350 (51%) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |