Probe CUST_2679_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2679_PI426222305 | JHI_St_60k_v1 | DMT400031457 | GTTCCTTGTCCATACAATACAATACGGTACAACGGGTAACACTTTTTTGCTTATTGTATA |
All Microarray Probes Designed to Gene DMG400012063
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2626_PI426222305 | JHI_St_60k_v1 | DMT400031458 | GTTCCTTGTCCATACAATACAATACGGTACAACGGGTAACACTTTTTTGCTTATTGTATA |
| CUST_2746_PI426222305 | JHI_St_60k_v1 | DMT400031456 | GTTCCTTGTCCATACAATACAATACGGTACAACGGGTAACACTTTTTTGCTTATTGTATA |
| CUST_2679_PI426222305 | JHI_St_60k_v1 | DMT400031457 | GTTCCTTGTCCATACAATACAATACGGTACAACGGGTAACACTTTTTTGCTTATTGTATA |
Microarray Signals from CUST_2679_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 395.732 | 52.6405 | 1.01653 | 0.0661456 |
| ABA 1h | 433.408 | 25.3283 | 1.27718 | 0.0744538 |
| ACC 1h | 391.948 | 64.3844 | 0.969052 | 0.0948574 |
| BABA 1h | 313.78 | 34.6341 | 0.839543 | 0.049616 |
| Chitin 1h | 303.113 | 40.2644 | 0.864503 | 0.0564419 |
| Epi 1h | 252.597 | 15.0263 | 0.761248 | 0.0452041 |
| SA 1h | 356.336 | 33.5303 | 0.898417 | 0.0683555 |
| Me-JA 1h | 182.669 | 17.2654 | 0.579656 | 0.0485924 |
| Control 6h | 455.54 | 130.219 | 1.05994 | 0.299935 |
| ABA 6h | 1187.46 | 68.7334 | 2.91649 | 0.168657 |
| ACC 6h | 427.633 | 55.3468 | 0.959124 | 0.0561901 |
| BABA 6h | 507.945 | 29.7075 | 1.18264 | 0.102126 |
| Chitin 6h | 507.923 | 47.9204 | 1.2361 | 0.140896 |
| Epi 6h | 481.653 | 28.6407 | 1.11261 | 0.117587 |
| SA 6h | 413.594 | 57.0786 | 1.07081 | 0.0628183 |
| Me-JA 6h | 543.329 | 106.662 | 1.37226 | 0.155886 |
Source Transcript PGSC0003DMT400031457 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G47010.1 | +3 | 0.0 | 602 | 283/479 (59%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:19317505-19319252 FORWARD LENGTH=493 |