Probe CUST_25533_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_25533_PI426222305 | JHI_St_60k_v1 | DMT400022422 | GGTCTTATGTATGTCCTCAAAATCTGTCAATATGTGTATGTAATTTGCAAGCTCTTCAGT |
All Microarray Probes Designed to Gene DMG400008691
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_25533_PI426222305 | JHI_St_60k_v1 | DMT400022422 | GGTCTTATGTATGTCCTCAAAATCTGTCAATATGTGTATGTAATTTGCAAGCTCTTCAGT |
Microarray Signals from CUST_25533_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1431.42 | 156.629 | 0.938273 | 0.0542284 |
| ABA 1h | 857.589 | 162.407 | 0.620025 | 0.0748735 |
| ACC 1h | 1116.68 | 401.762 | 0.634586 | 0.20631 |
| BABA 1h | 1145.32 | 189.082 | 0.763234 | 0.0594724 |
| Chitin 1h | 874.635 | 70.4898 | 0.640361 | 0.037067 |
| Epi 1h | 800.62 | 101.923 | 0.602234 | 0.0745071 |
| SA 1h | 1725.51 | 576.485 | 1.00336 | 0.366005 |
| Me-JA 1h | 2877.21 | 363.49 | 2.29803 | 0.132713 |
| Control 6h | 2151.1 | 340.126 | 1.38394 | 0.104016 |
| ABA 6h | 1733.95 | 293.678 | 1.05228 | 0.114913 |
| ACC 6h | 1874.76 | 108.459 | 1.08208 | 0.129699 |
| BABA 6h | 1800.86 | 104.329 | 1.06369 | 0.0614634 |
| Chitin 6h | 1815.68 | 153.144 | 1.12215 | 0.133586 |
| Epi 6h | 1918.94 | 167.271 | 1.11986 | 0.144928 |
| SA 6h | 1634.05 | 397.372 | 1.01513 | 0.179323 |
| Me-JA 6h | 2662.3 | 154.233 | 1.76664 | 0.102029 |
Source Transcript PGSC0003DMT400022422 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G55960.1 | +1 | 0.0 | 800 | 409/646 (63%) | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:22662726-22664762 FORWARD LENGTH=648 |