Probe CUST_2440_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2440_PI426222305 | JHI_St_60k_v1 | DMT400072213 | GGTGTTGTTTCTGTTTGTCCCTTATAAAACTGTGAATTCACTTACAAGTCCATTGTGTTT |
All Microarray Probes Designed to Gene DMG400028100
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2440_PI426222305 | JHI_St_60k_v1 | DMT400072213 | GGTGTTGTTTCTGTTTGTCCCTTATAAAACTGTGAATTCACTTACAAGTCCATTGTGTTT |
Microarray Signals from CUST_2440_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 409.801 | 24.0181 | 0.887216 | 0.0646873 |
| ABA 1h | 247.241 | 21.1999 | 0.602748 | 0.0901936 |
| ACC 1h | 381.522 | 105.41 | 0.726072 | 0.207134 |
| BABA 1h | 282.753 | 24.4402 | 0.63198 | 0.0376272 |
| Chitin 1h | 298.01 | 23.3719 | 0.715452 | 0.0434812 |
| Epi 1h | 286.359 | 54.1651 | 0.689465 | 0.134885 |
| SA 1h | 476.394 | 49.6459 | 0.996772 | 0.107994 |
| Me-JA 1h | 109.748 | 9.58182 | 0.28957 | 0.0194841 |
| Control 6h | 807.268 | 144.861 | 1.68372 | 0.185047 |
| ABA 6h | 1095.23 | 122.714 | 2.2093 | 0.205109 |
| ACC 6h | 864.681 | 50.3043 | 1.6317 | 0.168427 |
| BABA 6h | 892.923 | 61.5648 | 1.72375 | 0.0998691 |
| Chitin 6h | 761.28 | 44.3042 | 1.54794 | 0.0897952 |
| Epi 6h | 967.652 | 61.2537 | 1.85645 | 0.202281 |
| SA 6h | 486.122 | 137.887 | 0.961886 | 0.227056 |
| Me-JA 6h | 553.034 | 110.768 | 1.15682 | 0.141376 |
Source Transcript PGSC0003DMT400072213 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g080960.1 | +2 | 1e-172 | 488 | 248/267 (93%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:61464101-61464901 transcript_region:SL2.50ch10:61464101..61464901+ go_terms:GO:0003700 functional_description:Transcription factor (Fragment) (AHRD V1 **-* D6MKQ8_9ASPA); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class |
| TAIR PP10 | AT3G10760.1 | +2 | 1e-93 | 288 | 187/341 (55%) | Homeodomain-like superfamily protein | chr3:3369814-3370821 FORWARD LENGTH=335 |