Probe CUST_2276_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2276_PI426222305 | JHI_St_60k_v1 | DMT400028618 | CTAAAGATCCTTATGACAAAGCTATCGCTCGTTTTTGGGCTAAGTTCCTCGATGATAAGG |
All Microarray Probes Designed to Gene DMG400011012
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2276_PI426222305 | JHI_St_60k_v1 | DMT400028618 | CTAAAGATCCTTATGACAAAGCTATCGCTCGTTTTTGGGCTAAGTTCCTCGATGATAAGG |
| CUST_2203_PI426222305 | JHI_St_60k_v1 | DMT400028619 | TATTTATCTAGCCAGCTTTCTAGGAATAAGACTTGTACACAAAGTCCATAGCAATCCGCT |
Microarray Signals from CUST_2276_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1896.97 | 247.681 | 1.47118 | 0.109893 |
| ABA 1h | 1867.77 | 475.037 | 1.53075 | 0.409761 |
| ACC 1h | 1705.51 | 605.583 | 1.06299 | 0.535881 |
| BABA 1h | 1590.91 | 440.431 | 1.1866 | 0.271298 |
| Chitin 1h | 1000.13 | 227.408 | 0.837994 | 0.122106 |
| Epi 1h | 1207.36 | 69.9364 | 1.09917 | 0.0716355 |
| SA 1h | 2718.26 | 761.045 | 1.9146 | 0.484955 |
| Me-JA 1h | 707.348 | 143.296 | 0.655289 | 0.0825186 |
| Control 6h | 1063.23 | 273.154 | 0.768694 | 0.171541 |
| ABA 6h | 2217.48 | 582.96 | 1.526 | 0.363784 |
| ACC 6h | 1205.43 | 69.7703 | 0.829022 | 0.0968318 |
| BABA 6h | 2656.5 | 243.212 | 1.85926 | 0.107372 |
| Chitin 6h | 1267.19 | 82.7493 | 0.936293 | 0.0541157 |
| Epi 6h | 1663.79 | 300.39 | 1.13062 | 0.191504 |
| SA 6h | 1142.88 | 277.514 | 0.848174 | 0.145993 |
| Me-JA 6h | 795.243 | 331.882 | 0.531615 | 0.189414 |
Source Transcript PGSC0003DMT400028618 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g084960.1 | +3 | 8e-104 | 201 | 107/119 (90%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63636357-63637715 transcript_region:SL2.50ch10:63636357..63637715+ functional_description:Glutathione S-transferase-like protein (AHRD V1 ***- A8DUB0_SOLLC); contains Interpro domain(s) IPR004046 Glutathione S-transferase, C-terminal |
| TAIR PP10 | AT3G09270.1 | +1 | 9e-51 | 129 | 62/111 (56%) | glutathione S-transferase TAU 8 | chr3:2848407-2849226 REVERSE LENGTH=224 |