Probe CUST_22615_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_22615_PI426222305 | JHI_St_60k_v1 | DMT400078172 | CTGTAGACTTGTTGTGGTACAATAGACTTGGCCATGTGCCTTTTGCAAAGATGAGAAACA |
All Microarray Probes Designed to Gene DMG400030409
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_22663_PI426222305 | JHI_St_60k_v1 | DMT400078171 | TAATTGTGCTTTCTATCATCATGTGCATCCTCCTAACACCTACCTTTGCCAGGGTGAGTG |
| CUST_22615_PI426222305 | JHI_St_60k_v1 | DMT400078172 | CTGTAGACTTGTTGTGGTACAATAGACTTGGCCATGTGCCTTTTGCAAAGATGAGAAACA |
Microarray Signals from CUST_22615_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.1901 | 3.00933 | 0.925448 | 0.530477 |
| ABA 1h | 5.07377 | 2.93993 | 1.01937 | 0.586447 |
| ACC 1h | 5.70527 | 3.30554 | 0.980915 | 0.568022 |
| BABA 1h | 5.50175 | 3.19282 | 1.00619 | 0.582639 |
| Chitin 1h | 5.28531 | 3.078 | 1.05972 | 0.598313 |
| Epi 1h | 5.18231 | 3.00763 | 1.07649 | 0.611355 |
| SA 1h | 5.22283 | 3.02689 | 0.897464 | 0.519708 |
| Me-JA 1h | 5.38783 | 3.13398 | 1.1627 | 0.672666 |
| Control 6h | 6.33864 | 3.23228 | 1.0998 | 0.576961 |
| ABA 6h | 31.618 | 8.15024 | 4.93124 | 0.979807 |
| ACC 6h | 6.51385 | 3.85531 | 0.982511 | 0.569005 |
| BABA 6h | 6.19871 | 3.60031 | 0.975416 | 0.564845 |
| Chitin 6h | 6.06249 | 3.51557 | 1.00571 | 0.583 |
| Epi 6h | 6.255 | 3.65809 | 0.970767 | 0.562268 |
| SA 6h | 5.79993 | 3.36402 | 1.03555 | 0.600513 |
| Me-JA 6h | 6.26641 | 3.23638 | 1.10496 | 0.576932 |
Source Transcript PGSC0003DMT400078172 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G21280.1 | +3 | 3e-17 | 81 | 42/167 (25%) | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237 |