Probe CUST_2219_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2219_PI426222305 | JHI_St_60k_v1 | DMT400072510 | CCTTCAAAAATGCACTTCTTTTAAGGATCCAACATGCTCCCAATGACATGATTGTTAATA |
All Microarray Probes Designed to Gene DMG400028212
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2559_PI426222305 | JHI_St_60k_v1 | DMT400072509 | AGTATGGTCTCTCTTCACTGTCATTTGTTCTAGTGTTTATTAACTGTCACATCTTTGCAG |
| CUST_2074_PI426222305 | JHI_St_60k_v1 | DMT400072512 | GCTACACCGAGAAAAACAACAAGATCAATAGTAGAAAATGCAGCATCTACATATACATCA |
| CUST_2219_PI426222305 | JHI_St_60k_v1 | DMT400072510 | CCTTCAAAAATGCACTTCTTTTAAGGATCCAACATGCTCCCAATGACATGATTGTTAATA |
Microarray Signals from CUST_2219_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 9.07347 | 3.20416 | 0.861302 | 0.34557 |
| ABA 1h | 5.21874 | 3.02609 | 0.58858 | 0.340337 |
| ACC 1h | 8.03562 | 3.6338 | 0.746155 | 0.367167 |
| BABA 1h | 11.5728 | 3.36776 | 1.10892 | 0.453715 |
| Chitin 1h | 7.7537 | 3.177 | 0.820965 | 0.362528 |
| Epi 1h | 5.34856 | 3.10303 | 0.617889 | 0.3559 |
| SA 1h | 7.31013 | 3.1473 | 0.668521 | 0.325092 |
| Me-JA 1h | 5.54591 | 3.22272 | 0.674524 | 0.390558 |
| Control 6h | 30.6279 | 8.47161 | 2.74041 | 0.733354 |
| ABA 6h | 6.60882 | 3.38683 | 0.614041 | 0.321599 |
| ACC 6h | 23.0023 | 4.59384 | 1.9235 | 0.353323 |
| BABA 6h | 25.3525 | 10.0982 | 1.95519 | 0.775744 |
| Chitin 6h | 32.1248 | 4.07404 | 2.99788 | 0.38313 |
| Epi 6h | 31.6079 | 4.224 | 2.75292 | 0.430405 |
| SA 6h | 16.1063 | 6.44052 | 1.40022 | 0.832043 |
| Me-JA 6h | 14.483 | 3.36843 | 1.37394 | 0.359205 |
Source Transcript PGSC0003DMT400072510 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g081420.1 | +2 | 0.0 | 684 | 423/448 (94%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:61809625-61812997 transcript_region:SL2.50ch10:61809625..61812997- go_terms:GO:0005515,GO:0006468 functional_description:Receptor like kinase, RLK |
| TAIR PP10 | AT3G03770.1 | +2 | 8e-107 | 357 | 231/421 (55%) | Leucine-rich repeat protein kinase family protein | chr3:945303-948436 REVERSE LENGTH=802 |