Probe CUST_2097_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2097_PI426222305 | JHI_St_60k_v1 | DMT400028623 | GGAGCGTGTACTATTTCATGGCCTGCTTTATAGTGTGTTATATCGAATTTATTATGTAGT |
All Microarray Probes Designed to Gene DMG400011016
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2097_PI426222305 | JHI_St_60k_v1 | DMT400028623 | GGAGCGTGTACTATTTCATGGCCTGCTTTATAGTGTGTTATATCGAATTTATTATGTAGT |
Microarray Signals from CUST_2097_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 3077.72 | 531.755 | 1.34402 | 0.149506 |
| ABA 1h | 3468.88 | 345.196 | 1.7428 | 0.266463 |
| ACC 1h | 4443.6 | 1161.59 | 1.8021 | 0.402115 |
| BABA 1h | 2641.59 | 599.922 | 1.15456 | 0.188404 |
| Chitin 1h | 1814.39 | 104.97 | 0.904302 | 0.0522335 |
| Epi 1h | 2633.69 | 155.848 | 1.36116 | 0.0786035 |
| SA 1h | 4219.21 | 950.229 | 1.75657 | 0.280487 |
| Me-JA 1h | 1339.43 | 139.511 | 0.728794 | 0.0421146 |
| Control 6h | 552.763 | 110.655 | 0.237685 | 0.0284877 |
| ABA 6h | 2220.1 | 492.039 | 0.884785 | 0.180296 |
| ACC 6h | 2758.29 | 245.007 | 1.0711 | 0.0716957 |
| BABA 6h | 5815.88 | 883.206 | 2.27202 | 0.405272 |
| Chitin 6h | 619.274 | 166.36 | 0.242386 | 0.0661245 |
| Epi 6h | 481.446 | 97.3278 | 0.183942 | 0.0237532 |
| SA 6h | 451.254 | 76.3288 | 0.198039 | 0.0137651 |
| Me-JA 6h | 354.173 | 81.2192 | 0.152158 | 0.0226794 |
Source Transcript PGSC0003DMT400028623 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g085030.1 | +1 | 2e-122 | 354 | 190/200 (95%) | evidence_code:10F1H1E1IEG genomic_reference:SL2.50ch10 gene_region:63683478-63684077 transcript_region:SL2.50ch10:63683478..63684077+ go_terms:GO:0005488 functional_description:Soul heme-binding family protein (AHRD V1 **** D7LKR5_ARALY); contains Interpro domain(s) IPR006917 SOUL haem-binding protein |
| TAIR PP10 | AT2G37970.1 | +1 | 7e-81 | 249 | 134/215 (62%) | SOUL heme-binding family protein | chr2:15891027-15891704 FORWARD LENGTH=225 |