Probe CUST_20711_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_20711_PI426222305 | JHI_St_60k_v1 | DMT400011985 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
All Microarray Probes Designed to Gene DMG400004702
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_20758_PI426222305 | JHI_St_60k_v1 | DMT400011984 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
| CUST_20711_PI426222305 | JHI_St_60k_v1 | DMT400011985 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
Microarray Signals from CUST_20711_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 679.742 | 171.409 | 2.72962 | 0.486157 |
| ABA 1h | 519.951 | 228.35 | 1.99226 | 0.990487 |
| ACC 1h | 534.924 | 170.153 | 2.00781 | 0.554672 |
| BABA 1h | 466.892 | 78.893 | 1.99732 | 0.166374 |
| Chitin 1h | 332.959 | 19.5399 | 1.5741 | 0.121595 |
| Epi 1h | 361.105 | 35.1794 | 1.75916 | 0.142846 |
| SA 1h | 612.663 | 51.1922 | 2.52245 | 0.310745 |
| Me-JA 1h | 3008.1 | 441.57 | 15.3677 | 0.905408 |
| Control 6h | 206.138 | 55.5198 | 0.79793 | 0.188489 |
| ABA 6h | 129.501 | 12.4024 | 0.514167 | 0.0646848 |
| ACC 6h | 126.051 | 20.4217 | 0.456265 | 0.0341851 |
| BABA 6h | 161.129 | 15.1093 | 0.607893 | 0.0521501 |
| Chitin 6h | 154.615 | 9.70702 | 0.617544 | 0.0445358 |
| Epi 6h | 166.267 | 43.0844 | 0.576578 | 0.234373 |
| SA 6h | 126.354 | 19.6588 | 0.530459 | 0.0399335 |
| Me-JA 6h | 177.511 | 17.8467 | 0.751503 | 0.0459128 |
Source Transcript PGSC0003DMT400011985 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G16060.1 | +2 | 6e-97 | 215 | 99/135 (73%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr4:9094424-9096147 FORWARD LENGTH=289 |