Probe CUST_17738_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17738_PI426222305 | JHI_St_60k_v1 | DMT400066762 | GGGGTTGTTGTAATATTAATGCTTTATCCAGAGATGTTCTTGTTCGACTTGACATAATAC |
All Microarray Probes Designed to Gene DMG400025957
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_17738_PI426222305 | JHI_St_60k_v1 | DMT400066762 | GGGGTTGTTGTAATATTAATGCTTTATCCAGAGATGTTCTTGTTCGACTTGACATAATAC |
Microarray Signals from CUST_17738_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 3179.01 | 183.917 | 2.51141 | 0.185139 |
| ABA 1h | 3976.62 | 1694.24 | 3.00239 | 1.34134 |
| ACC 1h | 2450.62 | 1084.43 | 1.46322 | 0.824563 |
| BABA 1h | 1630.44 | 384.75 | 1.24617 | 0.225452 |
| Chitin 1h | 1018.24 | 256.992 | 0.832013 | 0.236722 |
| Epi 1h | 1972.03 | 533.389 | 1.68713 | 0.457892 |
| SA 1h | 1695.44 | 370.196 | 1.24499 | 0.199255 |
| Me-JA 1h | 957.389 | 105.506 | 0.917414 | 0.0530894 |
| Control 6h | 998.045 | 229.955 | 0.745537 | 0.129888 |
| ABA 6h | 2504 | 421.948 | 1.80554 | 0.276938 |
| ACC 6h | 1250.62 | 203.074 | 0.837798 | 0.0906084 |
| BABA 6h | 1201.19 | 145.214 | 0.836426 | 0.0820612 |
| Chitin 6h | 1143.46 | 103.695 | 0.842681 | 0.0874305 |
| Epi 6h | 1124.22 | 89.5266 | 0.783812 | 0.0453635 |
| SA 6h | 984.58 | 210.893 | 0.746831 | 0.0967922 |
| Me-JA 6h | 1176.57 | 245.526 | 0.895272 | 0.113198 |
Source Transcript PGSC0003DMT400066762 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G45380.1 | +3 | 8e-44 | 161 | 103/237 (43%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr2:18699588-18703093 REVERSE LENGTH=494 |