Probe CUST_10048_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_10048_PI426222305 | JHI_St_60k_v1 | DMT400082716 | CTGTTAGAGATGCTATATCAAAGATATTAGCCTGTGTCATAAAGGTGCTTCAAGAATGTT |
All Microarray Probes Designed to Gene DMG400032778
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_10062_PI426222305 | JHI_St_60k_v1 | DMT400082714 | GAAGAGAAGCTTCCAATAACTTTAAATATTGGTAAAACTTCCGTATCAGCTATCCTCCAT |
| CUST_10048_PI426222305 | JHI_St_60k_v1 | DMT400082716 | CTGTTAGAGATGCTATATCAAAGATATTAGCCTGTGTCATAAAGGTGCTTCAAGAATGTT |
Microarray Signals from CUST_10048_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 175.253 | 44.8097 | 1.83397 | 0.422013 |
| ABA 1h | 305.203 | 104.785 | 3.45866 | 0.972201 |
| ACC 1h | 157.935 | 28.6174 | 1.65176 | 0.2118 |
| BABA 1h | 142.208 | 23.2608 | 1.60538 | 0.161791 |
| Chitin 1h | 112.232 | 22.6222 | 1.34206 | 0.308627 |
| Epi 1h | 90.2354 | 6.07577 | 1.15982 | 0.0779344 |
| SA 1h | 152.934 | 48.9913 | 1.51576 | 0.485189 |
| Me-JA 1h | 393.018 | 22.9356 | 5.37185 | 0.552782 |
| Control 6h | 32.4576 | 10.3489 | 0.319252 | 0.0936133 |
| ABA 6h | 105.784 | 21.8625 | 1.06828 | 0.154223 |
| ACC 6h | 53.4366 | 5.05215 | 0.519105 | 0.04869 |
| BABA 6h | 72.5863 | 10.5668 | 0.708811 | 0.128016 |
| Chitin 6h | 16.7097 | 3.73251 | 0.168047 | 0.0417175 |
| Epi 6h | 35.0596 | 10.076 | 0.318765 | 0.115307 |
| SA 6h | 13.3784 | 4.65375 | 0.131702 | 0.0609628 |
| Me-JA 6h | 32.0973 | 5.24077 | 0.351077 | 0.0424884 |
Source Transcript PGSC0003DMT400082716 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G11760.1 | +3 | 4e-91 | 292 | 152/278 (55%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:3718529-3721123 FORWARD LENGTH=702 |