Probe CUST_20758_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_20758_PI426222305 | JHI_St_60k_v1 | DMT400011984 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
All Microarray Probes Designed to Gene DMG400004702
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_20758_PI426222305 | JHI_St_60k_v1 | DMT400011984 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
| CUST_20711_PI426222305 | JHI_St_60k_v1 | DMT400011985 | TTGATCGAATTGTATCATCCGATGGACTTATCACCGTTTGTGGCTTCGGTTCTCTCCTCT |
Microarray Signals from CUST_20758_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 661.66 | 164.821 | 2.42663 | 0.427778 |
| ABA 1h | 498.034 | 198.224 | 1.83243 | 0.739784 |
| ACC 1h | 547.222 | 150.801 | 1.93034 | 0.443693 |
| BABA 1h | 510.268 | 75.8924 | 2.00826 | 0.12238 |
| Chitin 1h | 340.828 | 51.6719 | 1.44218 | 0.248691 |
| Epi 1h | 371.42 | 24.576 | 1.66043 | 0.0970485 |
| SA 1h | 660.798 | 84.7721 | 2.45895 | 0.426054 |
| Me-JA 1h | 3082.62 | 396.301 | 14.4474 | 0.834287 |
| Control 6h | 225.609 | 55.2907 | 0.811788 | 0.159929 |
| ABA 6h | 148.261 | 12.9042 | 0.537748 | 0.0339872 |
| ACC 6h | 120.793 | 23.5501 | 0.391383 | 0.076383 |
| BABA 6h | 181.441 | 11.2339 | 0.628375 | 0.0388044 |
| Chitin 6h | 162.194 | 11.7194 | 0.589291 | 0.0576934 |
| Epi 6h | 152.623 | 36.3949 | 0.490678 | 0.178557 |
| SA 6h | 120.396 | 38.9885 | 0.408885 | 0.129495 |
| Me-JA 6h | 165.081 | 21.7882 | 0.632075 | 0.0399218 |
Source Transcript PGSC0003DMT400011984 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G16060.1 | +3 | 3e-125 | 368 | 175/233 (75%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr4:9094424-9096147 FORWARD LENGTH=289 |