Microarray Probes on PGSC0003DMT400096782
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44018_PI426222305 |
JHI_St_60k_v1 |
AACAGAATGTGGGATTCTCCATCCTAATCCGGAAGTAGATGAAGGAGCAGGTCATAGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400096782
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400096782 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G63380.1 |
+1 |
0.0 |
717 |
403/634 (64%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:23407112-23410213 REVERSE LENGTH=1033 |
Transcript Sequence (1947 bp)
>PGSC0003DMT400096782 1947 pgsc_dm_v3.4
ATGTTTGAAGAAAACTTGCATTACCTATTCATGAACAAAATCACAACTGGAGGTGTACAA
GGTGTTGATCAGTCAAGTCTAGCGAAGCTTGTCAAAGATAAAAACTTTGACGAACTTGCT
AACATTGGAGGTGTACAAGGTGTTGCTGCTTCTCTCAAAAGTGATACAACTAATGGTGTA
AGCGGAGATTCAGAAGACGTTGCACGTAGACATGAGGCTTTTGGAAGCAACACGTATCGT
AAGGCACCTACTAAGAGTTTCTTCGTGTTTGTTTGGGAATCATTCAAGGATCCTACCATC
ATTATACTTTTGCTCTGTGCTGCTCTGTCTCTTGGATTTGGAATTAAGGAGCATGGACTG
AAAGAAGGATGGTACGATGGAGGGAGTATTTATGTCGCTGTGTTTCTTGTCAGCGCTGTT
TCGTCTATTAGTAATTTTAGACAAAACAGACAGTTTGATAAGCTTTCCAAAGTGAGCAAG
AATATTCCAGTGGAAGCTGTTAGAAAGGGGAGGCGCCAACAGATATCGATATTTGAAATT
GTTGTTGGAGATGTCATTTGCTTGAAGATTGGAGATCAAGTCCCTGCTGATGGGATTTTG
GTAGAAGGCCATTCTTTACAAGTGGATGAATCTAGCATGACAGGTGAAAGTGATCATGTC
GAGATTAATATCAGCCAAAATCCATTCTTGATTTCTGGCACGAAGGTTGTCGATGGCTAT
GGCATGATGCTTGTGATATCGGTTGGAATGAACACCACCTGGGGTGAAATGATGAGCCAA
ATCAGCAGTAATTCTAATGAGCAAACCCCTCTCCAAGAACGACTCAACAAGCTTACTACA
TCGATTGGTAAAGTTGGGTTGCTAGTTGCTTTCTTAGTTCTTGTTGTCCTATTGGTTAGA
TACTTTACTGGCACCACAAAAGATGAGAATGGTAAAAAAGAATTCAACGGGAGCAAGACA
TCATCCGATGATGTGATCAATGCTGTGGTGGGAATTGTTGCTGCCGCTGTTACCATTGTT
GTTGTCGCGATTCCTGAAGGCTTGCCTTTAGCTGCTACACTTACTCTGGCTTATTCCATG
AAGAGAATGATGGCTGATCAGGCAATGGTGATGAAGCTCTCCGCATGTGAGACTATGGCC
TCTGCCACCACCATCTGTACAGACAAAACAGGTACTCTTACATTAAATAAGATGACCGTG
ACAAAGTTTTTCTTAGGCAAACAGCACGTGAAAGCGGAAAGTCATACAACAATTTCAGTC
AAAGTTCTTGAATTATTACATCAAGGTGTTGGATTAAACACTACAGGTAGTGTTTTCAAG
TCCACTGATTCATGTTCCAGCTTCGAGTTCTCAGGCAGCCCTACTGAAAAAGCTATTCTT
TTGTGGGCTGTTACGGAACTGAACATGGATATGGATCAAATGAAAAGAAATTTCAACATT
CTACATATGGAAGCTTTCAATTCAGAGAAAAAGGAGAGCGGTGTCCTGATCAAGAACATT
ACAGATGGCACAATTCATGCACATTGGAAAGGTGCAGCTGAAATGATTTCAAGAATGTGC
TCCCACTACTATGATCTAGAAGGGAATGTAAAACCTCTCGACCAATCAGACAAGGAAGAA
TGTGATAGGATAATTGAAGGAATGGCTGCCAGTAGCCTTCGATGTATCGCATTTGCTCAC
AAGCAAGTGATAAAAGCTGAGCAGGAGGATCATGAGCATATTCATGGAAATGTTCCAGAC
AACTCTATCATTCTTTTGGGCATTGTTGGCCTAAAAGATCCATGTCGACCTGGCGTGAAG
AAAGCTGTGGAAGCTTGCCAAAATGCTGGTGTGAACATCAAGATGATTACTGGTGACAAT
GTGTTCACTGCAAAAGCCATAGCAACAGAATGTGGGATTCTCCATCCTAATCCGGAAGTA
GATGAAGGAGCAGGTCATAGAAGGTGA
