Microarray Probes on PGSC0003DMT400093936
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43992_PI426222305 |
JHI_St_60k_v1 |
AAGTTTGCAAATACAGAGAGGCTGAATTGGGGGCAATGGGGAATCTGCATTGGATTTGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400093936
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400093936 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22910.1 |
+1 |
0.0 |
741 |
381/550 (69%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388 REVERSE LENGTH=1017 |
Transcript Sequence (3702 bp)
>PGSC0003DMT400093936 3702 pgsc_dm_v3.4
ATGAACAATATTACAACTGATTTTCCAGCAGAAATTGAATCCTCCAACAAAAAAAGATGG
CACTTAGCGTTTGCTACCATCTACTGTTCCAGAGCTTTTAAAAATAAGGTATCACCTGCC
ATTGTGCCATCTTATAGTCATGGATCACCTGCTTACAATCCAACAAAAGTACTTGGTGAT
ACAATCGCGATTGATGTAGTTCAAGACCACCCTTTTTTCTCAGGCATTGATCACTCAAGT
CTAGCTAAGCTTGTCAAAGATAAAAACACTGACGAACTTGCTGACCTTGGAGGTGTACAA
GGTGTTGCTGCTTCTCTCAAAACTGATACAACTAATGGTGTAAGCGGAGATCCAGAAGAC
GTTGCACGTAGACATGAGGCTTTTGGAAGCAACATGTATCGTAAGGCACCTGCTAAGAGT
TTCTTCATTTTTGTTTGGGAATCATTCAAATATCCCACCATCATTGTACTTTTGATCTGG
GGTGCTCTGTCTATTGTATTGGGAATTAAGGAGGATGGAGTGAAAGAAGGATGGTGTGAT
GGAGGGGGTATTTATGTCGCTGTGTTACTTTTCGTCACTGTTTCGTCTACTAGTCATTTT
AGACAAACCAGACAGTTTGATAAGCTTTCTAAAGAGACCAAAATTATTCAAGTAGAAGCT
GTTAGAAAGGGGAGGCGCCAACAGATATCAATATTTGAAATTGTGGTTGGAGATGTCATT
TGCTTGAAGATTGGAGATCAAGTCCCTGCTGATGGGATTTTGGTACAGGGTCATTCTTTA
CAAGTGGATGAATCTAGCATGACAGGTGAAAGTGATCATGTAGAGATTAATATCAGCCAA
AATCCATTCTTGATTTCTGGCACTAAGGTTGTCGATGGCTATGGAATGATGCTTGTGACA
TCGGTTAACATGAACACGACCTGGGGTGAAATGATGAGCGAAATTAGCAGTGGCCCTAAC
GAGCACACCCCTCTCCAAGAACGACTCGAAAAGCTCACTTCATCAATTGATAAAGTTGGA
TGGTTAGTTGCCTTCTTGGTTTTTGTTGTCCAATTGGTACTATACTTTACCGGGACCACA
AAAGATGAGAATGGGAATAAAAAATTCAACCGGAGCAAGACATCATCCGGTGATGTGATC
AATGCTGTGGTGGGAATTGTTGCTAATGCTGTTATCATTGTTGTTGTCGCGATTCCTGAA
GGCTTACCTTTAGCTATTACACTTACTCTGGCTTACCTGATGAAGAGAATGATGGATGAT
AAGGCAATAGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGCTCTGCAACCATCATCTGT
ACAGACAAAACAGGTACTCTTACATTAAACAAGATGACTGTCACAAAGTTTTTCTTAGGC
ATACAGCACGTGAAGGCAGAAAGTCATACAACAATTTCAGCAAAAGTTCTTGAATTATTC
CATCAAGGGGTTGGATTAAACACTACAGGTAGTGTTTTCAAGTCCTCCGATCCATCTTCC
AACTTTGAGTTCTCAGGCAGCCCTACTGAAAAAGCTATTCTTTCATGGGCTGTTACGGAA
TTGAATATGGAGATGGATCAAATCAAAAGAAATTTCAACATTCTACATGTGGAAGCTTTC
AATTCAGAGAAAAAGAAGAGTGGTGTCCTGATCAAGAACAACAGTGATGGCACAATTCAT
GCACATTGGAAAGGTGCTGCTGAAATGATTTCAAGAATGTGCTCCCATTACTATGATCTA
GAAGGGAACGTAAAACCTCTCGAGGAATCAGATAAGGAAGAATGTGATAGGATAATTGAA
GGAATGGCTGCCAGCAGCCTCCGATGTATTGCATTCGCACACAAGCAAGTGCCAAAAGCT
GAGCAGGAGGATCATGAACATATGCATGGAAATGTTCCAGACAACTCTATAATTCTTTTG
GGCTTTCTTGGCCTAAAAGATCCATGTCGACCTGGCATGAAGAAAGCTGTGGAAGATTGC
CAGAATGCTGGTGTGAAGATCAAGATGATCACTGGAGACAATGTTTTCACTGCAAAAGCC
ATGGCAGAAATTCATACATCAATTTCGGCAAAAGTTCTTGAACTATTCCATCAAGGGGTT
GGATTAAACACTACAGGTAGTGTTTTCAAGTCCTCCGATCCATCTTCCAACTTTGAGTTC
TCAGGCAGCCCTACTGAAAAAGCTATTCTTTCATGGGCTGTTACGGAATTGAATATGGAG
ATGGATCAAATCAAAAGAAATTTCAACATTCTACATGTGGAAGCTTTCAATTCAGAGAAA
AAGAAGAGTGGTGTCCTGATCAAGAACAACAGTGATGGCACAATTCATGCACATTGGAAA
GGTGCTGCTGAAATGATTTCAAGAATGTGCTCCCATTACTATGATCTAGAAGGGAACGTA
AAACCTCTAGAGGAATCAGATAAGGAAGAATGTGACAGGATAATTGAAGGAATGGCTGCC
AGCAGCCTGAGATGTATCGCATTCGCACACAAGCAAGTGCCAAAAGCTGAGCAGAAGGAT
AATGAACATATGCATGGAAATGTTCCAGACAACTCTTTCATTCTTTTGGGCTTTGTTGGC
CTAAAAGATCCATGTCGACCAGGTGTGAAGAAAGCAGTGGAAGCTTGCCAAAGTGCTGGT
GTGAACATCAAGATGATCACTGGAGACAATGTTTTCACTGCAAAAGCCATAGCAACAGAA
TGTGGGATTCTTCATCCTAATCAGGAAGTAGATGAAGGAGAAGTCATAGAAGGTGAAGAA
TTTCGCAGCCTCACAGATGAAGAACGGATGGAGAGAGTGGAGAAGATATGCGTGATGGCA
AGATCATCCCCTTTTGACAAACTTCTAATGGTGCAGTGCTTGAGAAAGAAAGGTCATGTG
GTTGCGGTCACAGGTGATGGAGCAAACGATGCACCAGCTTTAAAGGAAGCAGATATAGGA
CTTTCTATGGGGATTCAGGGGACTGAAGTAGCTAAAGAGAGTTCTGATATTGTCATCTTA
GATGCTAATTTTGCTTCAGTTGTCACAATTCTGAAATGGGGAAGATGTTTCTATATCAAC
ATCCAGAAATTCATCCAATTTCAGCTCACAGCAAATGTGGCCGCGCTCATGATCAGCTTT
GTAGCAGCTGTTTTGTCTGGTGAGGAACCACTCACATCAGTACAATTGCTATGGGTAAAT
TTGATCATGGACACATTAGGGGCATTAGCACTTGCTACAGAGAAGCCAACCGAGGAAGTC
ATGAAGAAGAAACCAGTCGGTAGGACAGCACCACTTATCACGAATATTATGTGGAGGAAT
CTAATGGCTCAAGCTTCATACCAGATTGCTGTTTTATCAACCTTACAATTCAAAGGAGAA
TCAATCTTTGGTGTTAGCAAGAAGGTAAACGATACGTTGTTTTTCAACACGTTTGTTCTT
TGCCAAGTGTTCAATGAATTCAACGCACGAAACCTGGAGGAGAAGAATGTCTTTAAGGGA
ATACACAAGAACAAGTTGTTCATGGCCATCATCGGAATAACATTGGTTCTCCAAGTGGTG
ATGGTTGAGTTTCTAAAGAAGTTTGCAAATACAGAGAGGCTGAATTGGGGGCAATGGGGA
ATCTGCATTGGATTTGCAGCTGCATCTTGGCCAATTGGTTGGCTTGTCAAGTGCATAAAT
GTCCCAGAGAGACCAATCTTCAGTTATCTCAGGTTAAAATAG
