Microarray Probes on PGSC0003DMT400089589
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44024_PI426222305 |
JHI_St_60k_v1 |
AATTTTCAGTCAGAAGTACTTTCCGGTACCGGTGATTTTGTATCTCTCTTCCTAATATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400089589
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400089589 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22910.1 |
+1 |
4e-112 |
368 |
185/248 (75%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388 REVERSE LENGTH=1017 |
Transcript Sequence (2364 bp)
>PGSC0003DMT400089589 2364 pgsc_dm_v3.4
ATGAACATTACACTTGATTTGCCATCTGAAGTTGATTTCTCCAGCAAAAAAAGATGGCAC
TTAGCTTTTGCTACAATCTATTGTTCCAGAGCTTTTAAAATTAAGACCAGCACTAAAGCA
CTACATGGAGCTGCCTACAATCCAAAAAAAGCACTTCGTGAATCGACTGATACAATCGCG
ATTGATGTAGTTCAAGACCACCCTTTTTTCTCAGGCATTGATCACTCAAGTCTATCAAAG
CTTGTCAAGGATAAAAGCGTTGATGAACTTGCTAACCTTGGAGGTGTACAAGGTGTTGCT
GCTTCTCTCAAAAGTGATACAACTATTGGTGTGAGCGGAGATCCAGAAGACGTTGCACGT
AGACATGAGGCTTTTGGAAGCAACACGAATCGTAAGCCAGCTAGTAAAAGTTTCTTCATC
TTTGTTTGGGAATCATTCAAAGATCCTACTATCATTATACTTTTGCTCTGTGCTGCTCTG
TCTCTTGGATTTGGAATTAAGGAGCATGGACTGAAAGAAGGATGGTACGATGGAGGGAGT
ATTTATGTCGCTGTGTTTCTTGTCATCGCTGTTTCGTCTATTAGTAATTTCAGACAAAAC
AGACAGTTTGATAAGCTTTCCAAATACTTTACTGGGACAACAAAAGATGAGAATGGGAAC
AAAGAATTCAACGGGAGCAAGACATCATCTGATGATGTGATCAATGCTGTGGTGGGAATT
GTTGCTGCTGCTGTTACCATTGTTGTAGTCGCGATTCCTGAAGGCTTGCCTTTAGCTGTT
ACACTTACTCTGGCTTATTCCATGAAGAGAATGATGGCTGATCAGGCAATGGTTAGGAAG
CTCTCCGCATGTGAGACTATGGGATCTGCCACCACCATCTGTACAGACAAAACAGGCACT
CTTACATTAAATAAGATGACCGTGACAAAGTTTTTCTTAGGCAAACAACACGTGAAGGCA
GAAAGTCATACATCAATTTCAGCAAAAGTTCTTGAACTATTCCATCAAGGGGTTGGATTA
AACACTACTGGTAGTGTTTTCAAGTCCTCCGATCCATCTTCCAGCTTTGAGTTCTCAGGC
AGCCCTACTGAAAAAGTTATTCTTTCATGGGCTGTTATGGAACTGAACATGGAGATGGAT
CAAATCAAAAGAAATTTCAACATTCTACATGTGGAAGCTTTCAATTCAGAGAAAAAGAAG
AGCGGTGTCCTGATCAAGAACATCAGTGATGGCACAATTCATGCACATTGGAAAGGTGCT
GCTGAAATGATTTCAAGAATGTGCTCCCATTACTATGATCTAGAAGGGAACGTAAAACCT
CTAGAGGAATCAGATAAGGAAGAATGTGACAGGATAATTGAAGGAATGGCTGCCAGCAGC
CTGAGATGTATCGCATTCGCACACAAGCAAGTGCCAAAAGCTGAGCAGAAGGATAATGAA
CATATGCATGGAAATGTTCCAGACAACTCTTTCATTCTTTTGGGCTTTGTTGGCCTAAAA
GATCCATGTCGACCAGGTGTGAAGAAAGCAGTGGAAGCTTGCCAAAGTGCTGGTGTGAAC
ATCAAGATGATCACTGGAGACAATGTGTTCACTGCAAAAGCCATAGCAAGGTGTGTCTAT
AACAACATCCAGAAATTCATCCAATTTCAGCTCACAGTAAATGTGGCTGCGCTCGTGATC
AATTTTGTAGCTGCTGTTTCATCTGGTGAGGTACCACTCACAGCAGTACAGTTGCTGTGG
GTAAATTTGATCATGGACACATTGGGGGCATTAGCACTTGCGACAGAGAAGCCAACCGAG
GAACTCATGAATAAGAAACCAGTCGGTAGGACTGCACCGCTTATCACCAACATTATGTGG
AGAAATCTAATGGCTCAGGCCTTGTATCAGATTGCTGTTTTATTGACCTTACAATTCAGA
GGAGAATCAATCTTTGGTGTCAGCAAGAGGGTAAACGATACATTGATCTTCAACACATTT
GTTCTTTGCCAAGTGTTCAATGAATTCAACGCGCGAAACCTGGAGAAGAAGAATGTCTTT
AAGGGAATACACAAGAACAAGTTGTTCATGGCAATCATCGGAATAACATTGGTTCTCCAA
GTGGTGATGGTGGAGTTCCTAAAGAAGTTCGCAATTACAGAGAGGCTGAATTGGGGGCAA
TGGGGAATCTGCATTGGATTTGCAGCTGCATCTTGGCCAATTGGTTGGCTTGTCAAGTGC
ATAGCTGTCCCAGAGAGACCAATCTTCAGTTATCTCAGACTGATCGCCGATGGCCGATGG
CCGATGGCCGATGCAATGCCTGAGAATTTTCAGTCAGAAGTACTTTCCGGTACCGGTGAT
TTTGTATCTCTCTTCCTAATATGA
