Microarray Probes on PGSC0003DMT400089336
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44023_PI426222305 |
JHI_St_60k_v1 |
CCCAGAGAGACCATTCTTTAGTTATCTAAGGTTGAATTACTTGAAAGCCTTGTTTAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400089336
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400089336 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G22910.1 |
+1 |
0.0 |
850 |
487/771 (63%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388 REVERSE LENGTH=1017 |
Transcript Sequence (2718 bp)
>PGSC0003DMT400089336 2718 pgsc_dm_v3.4
ATGAACAGAATCACAACTGATTTGTCAAAAGAAATTGAAACCTCCAACAAAAAAAGATGG
CACTTAGCTTTTGCGACCATCTATTGTTCCAGAGCTTTTAAAACTGCTTATAGTCATGGA
TCACCTGCCTACAATCCAAGAAAAATACTCTGTGTATCGAATGATACAATTGCGATTGAT
GTAGTTCAACACCACCCTTTTTTCTCAGGCATTGATCAGTCAAGTCTAGCTAAGCTTGTC
AAAGATAAAAACTTTGACGAACTTGCTAACATTGGAGGTGTACAAGGTGTTGCTGCTTCT
CTCAAAAGTGATACAACTAATGGTGTAAGCGGAGATTCAGAAGACGTTGCACGTAGACAT
GAGGCTTTTGGAAGCAACACGTATCGTAAGGCACCTACTAAGAGTTTCTTCGTGTTTGTT
TGGGAATCATTCAAGGATCCTACCATCATTATACTTTTGCTCTGTGCTGCTCTGTCTCTT
GGATTTGGAATTAAGGAGCATGGACTGAAAGAAGGATGGTACGATGGAGGGAGTATTTAT
GTCGCTGTGTTTCTTGTCATTGCTGTTTCGTCTATTAGTAATTTTAGACAAAACAGACAG
TTTGATAAGCTTTCCAAAGTGAGCAAGAATATTCCAGTAGAAGCTGTTAGAAAGGGAAGG
CGCCAACAGATATCGATATTTGAAATTGTTGTTGGAGATGTCATTTGCTTGAAGATTGGA
GATCAAGTCCCTGCTGATGGGATTTTGGTAGAAGGCCATTCTTTACAAGTGGATGAATCT
AGCATGACAGGTGAAAGTGATCATGTCGCGATTAATATCAGCCAAAATCCATTTTTGATT
TCTGGCACGAAGGTTGTCGATGGCTATGGCATGATGCTTGTGATATCGGTTGGAATGAAC
ACCACCTGGGGTGAAATGATGAGCCAAATCAGCAGTAATTCTAATGAGCAAACCCCTCTC
CAAGAACGACTCAACAAGCTTACTACATCGATTGGTAAAGTTGGGTTGCTAGTTGCTTTC
TTAGTTCTTGTTGTCCTATTGGTTAGATACTTTACTGGGACCACAAAAGATGAGAATGGG
AACAAAGAATTCAACGGGAGCAAGACATCATCTGATGATGTGATCAATGCTGTGGTGGGA
ATTGTTGCTGCCGCTGTTACCATTGTTGTTGTCGCGATTCCTGAAGGCTTGCCTTTAGCT
GTTACACTTACTCTGGCTTATTCCATGAAGAGAATGATGGCTGATCAGGCAATGGTTAGG
AAGCTCTCCGCATGTGAGACTATGGGATCTGCCACCACCATCTGTACAGACAAAACAGGC
ACTCTTACATTAAATAAGATGACCGTGACAAAGTTTTTCTTAGGCAAACAACACGTGAAG
GCAGAAAGTCATACATCAATTTCAGCAAAAGTTCATGAACTATTCCATCAAGGGGTTGGA
TTAAACACTACTGGTAGTGTTTTCAAGTCCTCCGATCCATCTTCCAGCTTTGAGTTCTCA
GGCAGCCCTACTGAAAAAGCTATTCTTTCATGGGCTGTTATGGAACTGAACATGGAGATG
GATCAAATCAAAAGAAATTTCAACATTCTACATGTGGAAGCTTTCAATTCAGAGAAAAAG
AAGAGCGGTGTCCTGATCAAGAACATCAGTGATGGCACAATTCATGCACATTGGAAAGGT
GCTGCTGAAATGATTTCAAGAATGTGCTCCCATTACTATGATCTAGAAGGGAACGTAAAA
CCTCTAGAGGAATCAGATAAGGAAGAATGTGACAGGATAATTGAAGGAATGGCTGCCAGC
AGCCTGAGATGTATTGCATTCGCACACAAGCAAGTGTCAAAAGCTGAGCAGAAGGATAAT
GAACATATGCATGGAAATGTTCCAGACAACTCTTTCATTCTTTTGGGCTTTGTTGGCCTA
AAAGATCCATGTCGACCAGGTGTGAAGAAAGCAGTGGAAGCTTGCCAAAGTGCTGGTGTG
AACATCAAGATGATCACTGGAGACAATGTGTTCACTGCAAAAGCCATAGCAACAGAATGT
GGAATTCTTCATCCTAATCAGGAAGTAGATGAAGGAGCAGTCATAGAAGGTGAAGAATTT
CGCAACCTAACAGATGAAGTACGGATGGAGAGAGTGGAGAAGATACGTGTGATGGCAAGA
TCATCCCCTTTTGACAAACTTCTAATGGTGCAGTGCTTGAGAAAGAAAGGTCATGTGGTC
GCGGTCACAGGTGATGGAACGAACGATGCACCAGCTTTAAAGGAAGCAGATATAGGACTT
TCTATGGGGATTCAGGGCACTGACGACAGAGAAGCCAACCGAGGAACTCATGAAGAAGAA
ACCAGTCGAGGAGAATCAATCTTTGGTGTCAGCAAGAGAGTAAACGATACGTTGATCTTC
AACACGTTTGTTCTTTGCCAAGTGTTCAATGAATTCAACGCGCGAAACCTGGAGAAGAAG
AATGTCTTTAAGGGAATACACAAGAACAAGTTGTTCATGGCGATCATCGGAATAACATTG
GTTCTCCAAGTGGTGATGGTGGAGTTTCTAAAGAAGTTTGCAAATACAGAGAGGCTGAAT
TGGGGGCAATGGGGAATTTGCATTGGATTTGCAGCTGCATCTTGGCCAATTGGTTGGCTT
GTCAAGTGCATAAATGTCCCAGAGAGACCATTCTTTAGTTATCTAAGGTTGAATTACTTG
AAAGCCTTGTTTAAATGA
