Microarray Probes on PGSC0003DMT400084751
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_14720_PI426222305 |
JHI_St_60k_v1 |
CCGATTGAACAAGAAGTAGAAAGTCCTATGCCTGCTAAGAAGCCGCGTTTATTTTTCGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084751
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084751 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G27730.1 |
+1 |
2e-39 |
139 |
107/267 (40%) |
salt tolerance zinc finger | chr1:9648302-9648985 REVERSE LENGTH=227 |
Transcript Sequence (789 bp)
>PGSC0003DMT400084751 789 pgsc_dm_v3.4
ATGTCGATTGAAGCTTTGAAGTCACCCACGGCGGCGGCGCTACCACCGCTTGAAGAGATT
GATGATTCGCATAATTTGGATTCATGGGCTAAAGGAAAACGATCGAAACGACCACGTATT
GAAAATCCACCAACTCCAGATCAGTATTTAGCACTCTGTTTACTCATGCTCGCTAACGAC
GACGGTACCGGATTTGGGAAAGGAAAAGGAACCGGTTCGATTGGTGTTGTTATTGAACAA
CAGCAGGAGAAAAAGTTGTTGAAGCCGGTCTTTATTAAAGAGAAAACAGAGCAATTATTC
AAGTGTAGCGAGTGTCCTAAAGTTTTTACTTCTTATCAAGCACTTGGTGGGCATAAAGCA
AGTCACCGTAAAATTAACGTTCCTGCCACCGGAAACGATGATAACAATCCGTCGACGTCT
ACTTCCACAAGCGGTAATATCTCTGCTCTGAATCCGAGTGGCCGTTCTCACGTGTGCTCT
GTTTGTCAAAAGGCTTTTCCAACTGGACAGGCTTTGGGTGGACACAAGCGCCGCCACTAC
GAAGGTAAACTCGGTGGTAACAATCGTTATATAAGCGGAGAAGGCCTTCAGAGTGGAAGC
GTTGTGACTACATCAGACGGCGGCGGCGCGTCGACTCCGATTGCGCGTGACTTTGACCTA
AACATGCCTGCCTCGCCGGGATGCCAATTGGATCTGACCATTGACTGTGGAGGTAGAAGT
CAACATCCGATTGAACAAGAAGTAGAAAGTCCTATGCCTGCTAAGAAGCCGCGTTTATTT
TTCGATTGA
