Microarray Probes on PGSC0003DMT400081398
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38022_PI426222305 |
JHI_St_60k_v1 |
GTAGGCTGGCTCTTTTTGTGAAGAAATGTGTCTTGCCTACTTAAAAAGATCATAATATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081398
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081398 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G40940.1 |
+3 |
0.0 |
713 |
377/516 (73%) |
ethylene response sensor 1 | chr2:17084635-17086819 REVERSE LENGTH=613 |
Transcript Sequence (2919 bp)
>PGSC0003DMT400081398 2919 pgsc_dm_v3.4
GAGTGGTAATATTAAAAACACAGATCAGTCTTTTGGTTGCAATGATCAGGAAACTTGTAT
AACCGTAAAAGCAATAACTAACAAATGTCTGTCCACCGCTAATGTTTATTAATGTCTCTT
CATTCATTATTTTTTCCCTCGAACTGCGATAAGCAAATGGGTGCACTGCACGACAAAGAT
GTCGTGGACAATGGTGTATGCATTTTTTGTCGTAGCTTTATTGTGTGTTTTACTATTTAT
GAAGAACCATTCCTCATTCTGTCTTTTTCAGATTCTTTGGACGAAACGAGGTAATGGAAT
CCTGTGATTGCATTGAGGCTTTACTGCCAACTGGTGACCTGCTGGTTAAATACCAATACC
TCTCAGATTTCTTCATTGCTGTAGCCTACTTTTCCATTCCATTGGAGCTTATTTATTTTG
TCCACAAATCTGCATGCTTCCCATACAGATGGGTTCTCATGCAATTTGGCGCTTTTATTG
TTCTCTGTGGAGCAACACACTTTATTAGCTTGTGGACATTCTTTATGCACTCTAAGACGG
TTGCTGTGGTTATGACCATATCAAAAATGTTAACAGCTGCTGTGTCCTGTATCACAGCTT
TGATGCTTGTTCACATTATTCCTGATTTGCTAAGTGTTAAAACACGAGAGTTGTTCTTGA
AAACTCGAGCTGAAGAGCTTGACAAGGAAATGGGCCTAATAATAAGACAAGAAGAAACTG
GCAGACATGTCAGGATGCTGACTCATGAGATAAGAAGCACACTCGACAGACACACAATCT
TGAAGACTACTCTTGTGGAGCTAGGTAGGACCTTAGACCTGGCAGAATGTGCTTTGTGGA
TGCCATGCCAAGGAGGCCTGACTTTGCAACTTTCCCATAATTTGAACAATCTAATACCTC
TGGGATCTACTGTACCAATTAATCTTCCTATTATCAATGAGATTTTTAGTAGCCCTGAAG
CAATACAGATTCCACATACGAATCCTTTGGCAAGGATGAGGAATACAGTTGGTAGATATA
TTCCACCAGAAGTAGTTGCTGTTCGTGTACCTCTTTTACACCTCTCAAGTTTTACTAATG
ACTGGGCTGAATTGTCTACTAGAAGTTATGCGGTGATGGTTCTGGTTCTCCCAATGAATG
GCTTAAGAAAGTGGCGTGAACATGAGTTAGAACTTGTGCAAGTTGTCGCAGATCAGGTTG
CTGTCGCTCTTTCACATGCTGCAATTTTAGAAGATTCCATGCGAGCCCATGATCAGCTCA
TGGAACAGAATATTGCTTTGGATGTAGCTCGACAAGAAGCAGAGATGGCCATCCGTGCAC
GTAACGACTTCCTTGCTGTAATGAACCATGAAATGAGAACGCCTATGCATGCAGTTATTG
CTCTGTGCTCTCTGCTTTTAGAAACAGACTTAACTCCAGAGCAGAGGGTTATGATCGAGA
CCATATTGAAGAGTAGCAATCTTCTTGCAACACTGATTAATGATGTTCTAGATCTTTCTA
GACTTGAAGATGGTATTCTTGAACTCGAAAATGGAACATTCAATCTTCATGGAATCTTAA
GAGAGGCCGTTAATTTGATAAAGCCAATTGCATCTTTGAAGAAATTATCTATAACTCTTG
CTTTGGCTCTGGATTTACCTATTCTTGCTGTGGGTGATGCAAAACGTCTTATCCAAATTC
TCTTAAATGTGGCGGGAAATGCTGTGAAGTTCACTAAAGAAGGTCATATCTCAATTGAGG
CTTCAGTTGCCAAACCAGAGTATGTGAGAGATTGTCATCCTCCTGAAATGTTCCCTATGC
CAAGTGATGGCCAGTTTTATTTGCGCGTCCAGGTTGAGCATTTCTATCCTCTTATCATGG
CTTAATGGTTGTACCATGTTTCTTGATGAAATGAGTTTGCATACAAATGCATGCAGTTCT
AAGAGCTGTTTGTTGGCTCGTCCAGGGAAAAAGTGTGTTATTTGTTCCAAAGCCAGCAAA
GAATCAGGATACAAGTTGAAACCGTCTTTGATTGCTAAATATTTCTATTAAATGTGAAGA
TATATGTTCTTCCTCTTCCCTTCGGATTGTCCATGTCTTGCAGGACAGAATCTCCTTTTG
GTTTCAGTTACTTTTATTGTTGTGGGAGGTTTACTTTGCAGTTCTGGATTTTGTTTATTT
CATCTCGAGTAGAATATCATTCAGAAAAAGAGATCTATATCATTCACTTGAAAATTAATC
CTTTTCAGATTATGTTCTTTCAGGTTAGAGATACTGGGTGTGGCATTAGTCCACAAGATA
TACCACTAGTATTCACCAAATTTGCAGAGGCGCGACCTACGTCAAATCGAAGTACTGGAG
GGGAAGGTCTGGGGCTCGCCATTTGCAGACGATTTATTCAACTTATGAAAGGTAACATTT
GGATTGAAAGTGAGGGCTCTGGAAAGGGAACCACTGTCACGTTTGTAGTGAAACTCGGAA
TCTGCAACCATCCAAATGCATTGCCTCTGCTACCTGTGCCCCCCAGAGGCAGGTTGAACA
AAGGTAGCGATGATCTGTTCAGGTATAAACAGTTCCGTGGAGATGATGGTGGGATATCTG
TGAACGCTCAACGCTATCAAAGAAGTCTGTAAATGACAAAGTGACTAGTGAATTTGAGAT
TTCTTCACTGTTTTGACGCTCCAATGACAGTTTCTTGTAACTAAATTAATTCAATGCTCG
TAAAGAGAGTATTGAAAATTCCAGCATCGTGAAAATGTAACTCTCGAATTTATACATCGA
GCTTCAGACAACAATATGTTAGGCCTACAATGCTCTAAGGAGCACTACTGGAGTTTGCTC
CGTAGGCTGGCTCTTTTTGTGAAGAAATGTGTCTTGCCTACTTAAAAAGATCATAATATC
ATATGATTTGAAAAACTTTTTGAAATAATTGTCTTTAAA
