Microarray Probes on PGSC0003DMT400080933
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36020_PI426222305 |
JHI_St_60k_v1 |
GGATTTGACACACACCTGACGATATTTTTGAAGAGTACGAGCAACAAAACATTTAAATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080933
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080933 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G25230.2 |
+1 |
0.0 |
649 |
361/468 (77%) |
rotamase FKBP 1 | chr3:9188257-9191175 FORWARD LENGTH=562 |
Transcript Sequence (2339 bp)
>PGSC0003DMT400080933 2339 pgsc_dm_v3.4
GTCACCATAGCTAAGAACTCTTTAGAACTCTCCAGATTTCTTGAACACTTCATCAATTCA
TAGAACACTCTAGACCCCCAGAGTGACCTTCTATATAAACTCACAAGCTGCAATGCATTT
CTCAACAAATCTTGAAAACCCCACATTTTCAATCTGCATTTTGCTTGAAATTAACTATCT
TTTGAGCTTTTTTTCAAGAAATTGTGAATACCCTTTACATTCTTTAGTACTAAGAAGGAA
GCTATGGATGAGGATTTTGAGTTTCCAGTATCTTCTTCTAACAATGCTGCTGCTGAAGAA
ATGGATATAGATATGGGGATGGGGATGGATGATTTCTCTGAACCTGACCCGATTATGAAG
GTTGATGAAGAGAAGGAGATAGGGAAAACTGGGATAAAGAAGAAGCTTTTGAAAGAAGGT
GAAGGTTGGGAGCATCCTAGTAAAGGAGATGAAGTTGAAGTTCATTATGTGGGTACATTG
CTGGATGGAACTCAATTTGATTCAAGTCGTGACCGTGGCACCCCGTTCAAGTTTAAGCTT
GGCGAAGGACAAGTGATTAAAGGGTGGGATGAAGGTATAAAGACAATGAAAAAAGGGGAG
AAAGCTTTGCTCACTATACCTCCAGATATGGCATATGGTGAATCTGGATCCCCTCCAACT
ATACCTCCAAATGCGACTTTACAGTTTGAAGTGGAATTGCTTTCTTGGATTAGTGTCAAA
GACATATGCAAGGATGGTGGAATATTCAAGAAGATACTTGTCGAAGGAGAGGGATGGCAG
AATCCGAAAAATCTTGATGAAGTGTTTGTTAAATACGAGGCACGCCTCGAGGATGGAACG
GTTGTGTCAAAATCCGATGGAGTGGAATTCACTGTGCAAGATGGCTATTTCTGTCCTGCT
TTGTCGAAAGCTGTTAAGACAATGAAGAAAGGAGAGAAAGTCTTACTGACAGTGCAGCCA
CAATATGCATTTGGAGAGACAGGTAAGGTGGCAAGCAGAGACGAAGGTGGTGTCCCACCA
AATGCCACCCTTCAAATAAATCTTGAATTGATTTCTTGGAAGATTGTCTCTGAAGTAACA
AATGACAAGAAGGTTCTGAAGAGAATTTTGAAGGAAGGAGAGGGCTATGAGCACCCAAAT
GACGGTGCTCTTGTAAAAGTGAAATTAATCGGAAAACTTCAGGATGGAACTGTTTTTGTG
AAGAAAGGACATGATGAGGAGGAGCCGTTTGAGTTTAAGATAGATGAAGAAAAAGTAGTC
GATGGACTAGATAAAGCGGTGAAAAAAATGAAGAAGGGTGAAATTGCTCTGATAACAATG
CAACCAGAGTATGCATTTGGTGCATTCGACTCTCCTCAAGAATTAGCTGTTGTTCCTGGC
AATTCGATCGTGTATTATGAAGTTGAGTTGGTGTCATTTGTGAAGGAGAAGGAATCCTGG
GATATGAATACTCAGGAAAAAATTGAAGCTGCAGGAAAGAAAAAGGAGGAAGGAAATGTA
TTGTTCAAGGCTGGGAAGTATGTGAGAGCATCAAAGAGATACGAAAAGGCTGTGAGCTTC
ATCGAATATGACTCCTCGTTCAGTGATGACGAGAAGCAGCAGGTAAAACTGCTCAAAGTT
AGTTGCAATCTGAACAATGCCGCGTGCAAGCTGAAACTGAAGGAATACAAAGAAGCAGCA
AAACTCTGTTCTGAAGTCTTAGAGATTGACAGTAAAAATGTCAAAGCTCTATACAGAAGG
GCTCAAGCTTACATACAACTCGTTGATTTGGACTTAGCAGAACTTGATATCAAGAAAGCA
CTTGAAATCGATCCAGATAACAGGTAAAAAAAGATTGTCTTTTCCTATGTTCCTCGGACC
ATCAACAATATTGGTGCACCCATGTCGGATTTGACACACACCTGACGATATTTTTGAAGA
GTACGAGCAACAAAACATTTAAATCATATATTATTGTGCTTATACTGTGATATGGATGAT
TCAGGGATGTCAAGTTAGAATACAAAGTTTTGAAAGAAAAGATAAAGGAGTACAACAAGA
AGGATGCTCAATTTTATGGCAACATTTTTGCAAAGATGAACAAATTAGAGCAAAGTGGAG
AAGCAAAAAATGAGGCAGCACCAATGGCTATAGATAGTAAGGCTTAACCAAGTACATGAC
ACAAATTATGGAATTAATGTCTCTTCCATAGTGTGCAGTCAAAAAGATATGTATGTAGTT
TTAGTTATCATTGGATTTGTTTGTACTTGAGAAAGTGTTTTGAGAAATGCATAATAAATA
ATCTTATCTTTATATACTTTGACTGAGCATGGAGCTTATGAGATAAAAGGATGATTTTT
